RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 BMP5P22003 454 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 RAC1P63000 192 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 C3AR1Q16581 482 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 C12orf73Q69YU5 71 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 TIGD3Q6B0B8 471 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 GFRALQ6UXV0 394 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 CD300LDQ6UXZ3 194 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 TMEM185AQ8NFB2 350 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 OR52I2Q8NH67 350 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 SIGLEC7Q9Y286 467 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 POM121CA8CG34 1229 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 BHLHE40O14503 412 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 PHF1O43189 567 aaPredicted RBP11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 PNLIPP16233 465 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 MYBPHQ13203 477 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 OR4Q3Q8NH05 313 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 REEP6Q96HR9 211 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 SEC22CQ9BRL7 303 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 SUCNR1Q9BXA5 334 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 GFOD1Q9NXC2 390 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 PPP1R14DQ9NXH3 145 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 CCL27Q9Y4X3 112 aa11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPRN2-203ENST00000389418 A0A0B4J203 849 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 TRAV1-2A0A0B4J238 106 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 MASP2O00187 686 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 ENSAO43768 121 aaKnown RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 TUSC2O75896 110 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 DFFBO76075 338 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 NXPH3O95157 252 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 HPP00738 406 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 DGCR2P98153 550 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 OXA1LQ15070 435 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 CEACAM16Q2WEN9 425 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 OGFOD3Q6PK18 319 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 OR4D6Q8NGJ1 314 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 POC1BQ8TC44 478 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 S100PBPQ96BU1 408 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 MALSU1Q96EH3 234 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 LHX9Q9NQ69 397 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 C20orf141Q9NUB4 165 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 HS3ST1O14792 307 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 SCAF4O95104 1147 aaKnown RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 PATE4P0C8F1 98 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 GALP22466 123 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 THBS4P35443 961 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 HOXA1P49639 335 aaPredicted RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 ZNF117Q03924 483 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 FMODQ06828 376 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 CD276Q5ZPR3 534 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 RBMS3Q6XE24 437 aaKnown RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 TMEM200AQ86VY9 491 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 PCNPQ8WW12 178 aaKnown RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 PLPPR2Q96GM1 343 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 OR8B4Q96RC9 309 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 EP400Q96L91 3159 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 NDUFB7P17568 137 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 CTF1Q16619 201 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 DRAM2Q6UX65 266 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 OTOSQ8NHW6 89 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 SPSB1Q96BD6 273 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 ZNF768Q9H5H4 540 aaKnown RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 DNAJB12Q9NXW2 375 aaKnown RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 A0A1W2PQD3 144 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 ANKRD34BA5PLL1 514 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 FUT6P51993 359 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 TLE4Q04727 773 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 TGIF1Q15583 401 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 NLRC3Q7RTR2 1065 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 OR51S1Q8NGJ8 323 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 OR2AE1Q8NHA4 323 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 LOXL4Q96JB6 756 aa11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 SIRT3Q9NTG7 399 aaPredicted RBP11.67□□□□□ -0.54
PTPRN2-203ENST00000389418 MYO7BQ6PIF6 2116 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 FBXO24O75426 580 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 LUMP51884 338 aaPredicted RBP11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 ALKAL2Q6UX46 152 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 RDH5Q92781 318 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 GLRA1P23415 457 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 UBE2IP63279 158 aaKnown RBP11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 FUT7Q11130 342 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 RAB35Q15286 201 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 ATPAF1Q5TC12 328 aaPredicted RBP11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 TMEM211Q6ICI0 200 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 UBALD1Q8TB05 177 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 SLC7A6Q92536 515 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 CMTM3Q96MX0 182 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■■■■■ 29.7
PTPRN2-203ENST00000389418 FOXJ3Q9UPW0 622 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 SMLR1H3BR10 107 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 M0R1B8 84 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 CLDN1O95832 211 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 PMP2P02689 132 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 CHATP28329 748 aa11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 PCBP3P57721 371 aaKnown RBP11.66□□□□□ -0.54
PTPRN2-203ENST00000389418 ASAH1Q13510 395 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms