RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PFN2P35080 140 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 BMI1P35226 326 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 TGFBR2P37173 567 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 ATP5IP56385 69 aaPredicted RBP0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 ACTR3P61158 418 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 TRAM2Q15035 370 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 PPP1R7Q15435 360 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 LUZP6Q538Z0 58 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 KLHL12Q53G59 568 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 XKR7Q5GH72 579 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 FAM104BQ5XKR9 115 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 STUMQ69YW2 141 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 APOBEC3HQ6NTF7 200 aaKnown RBP0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 CD300LGQ6UXG3 332 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 SCD5Q86SK9 330 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 FAM71AQ8IYT1 594 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 CMTM1Q8IZ96 169 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 CBR4Q8N4T8 237 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 ARL6IP6Q8N6S5 226 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR4C5Q8NGB2 326 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR10W1Q8NGF6 305 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR4A4PQ8NGN8 299 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR5K2Q8NHB8 316 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 APH1BQ8WW43 257 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 ZNF606Q8WXB4 792 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 SLC38A4Q969I6 547 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 HAUS1Q96CS2 278 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 KCNS1Q96KK3 526 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 MYOZ1Q9NP98 299 aaPredicted RBP0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 COMMD3-BMI1R4GMX3 469 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 R4GN34 69 aa0.81□□□□□ -2.28
RNU6-541P-201ENST00000384709 M0R3G1 203 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 NMT2O60551 498 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 SERPINB7O75635 380 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 GATBO75879 557 aaKnown RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 SCELO95171 688 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 OXTP01178 125 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 MMP7P09237 267 aaPredicted RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 TROVE2P10155 538 aaKnown RBP eCLIP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 ZNF35P13682 527 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 RAB4AP20338 218 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 USF1P22415 310 aaPredicted RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 IL32P24001 234 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 PCK1P35558 622 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 TALDO1P37837 337 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 MYCNOSP40205 109 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 TGM4P49221 684 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 CRISP1P54107 249 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 PRMT2P55345 433 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 CMC4P56277 68 aaPredicted RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 CYP24A1Q07973 514 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 GCSAMLQ5JQS6 135 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 PPM1LQ5SGD2 360 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 TPTE2P1Q5T6R2 138 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 TTC23LQ6PF05 361 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 SPESP1Q6UW49 350 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 RTL4Q6ZR62 310 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 SLC16A14Q7RTX9 510 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 MRPL55Q7Z7F7 128 aaKnown RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 FAM228AQ86W67 206 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 ZNF645Q8N7E2 425 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR2Z1Q8NG97 314 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 ENKURQ8TC29 256 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 PHOSPHO2Q8TCD6 241 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 FBXO32Q969P5 355 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR4K3Q96R72 315 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 KLF6Q99612 283 aaPredicted RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 PDCD1LG2Q9BQ51 273 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 SEC22CQ9BRL7 303 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 SLIRPQ9GZT3 109 aaKnown RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 TRIM45Q9H8W5 580 aaPredicted RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 RRAGDQ9NQL2 400 aaPredicted RBP0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 CLN6Q9NWW5 311 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 HMGXB4Q9UGU5 601 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 ADAMTS7Q9UKP4 1686 aa0.8□□□□□ -2.28
RNU6-541P-201ENST00000384709 ARPC4-TTLL3A0A0A6YYG9 625 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 CCL15-CCL14A0A0B4J2E2 113 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 HEATR9A2RTY3 570 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 CENPBD1B2RD01 187 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 H7C0C1 242 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 J3QKU1 62 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 J3QRE1 110 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 ERI3O43414 337 aaKnown RBP0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 CNMDO75829 334 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR2J3O76001 311 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 OR2F2O95006 317 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 KLHL2O95198 593 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 TACSTD2P09758 323 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 PGA4P0DJD7 388 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 PGA3P0DJD8 388 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 PGA5P0DJD9 388 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 CTRB1P17538 263 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 ATP5OP48047 213 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 MRPL19P49406 292 aaKnown RBP0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 GZMMP51124 257 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 FABP6P51161 128 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 CCNG1P51959 295 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 NDUFA8P51970 172 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 KRTAP12-1P59990 96 aa0.79□□□□□ -2.28
RNU6-541P-201ENST00000384709 EIF3EP60228 445 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms