RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SELEP16581 610 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 CAMLGP49069 296 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 CAMK2BQ13554 666 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 CEBPEQ15744 281 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 DCAF10Q5QP82 559 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 NECAP2Q9NVZ3 263 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 KLK11Q9UBX7 282 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 ZNF816-ZNF321PA0A0X1KG74 233 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 XRCC3O43542 346 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 SP9P0CG40 484 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 MGMTP16455 207 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 DCTDP32321 178 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 THBS4P35443 961 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 RPS23P62266 143 aaKnown RBP10.93□□□□□ -0.66
GABPB1-203ENST00000380877 MFGE8Q08431 387 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-203ENST00000380877 OR2A2Q6IF42 318 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 APOBEC3DQ96AK3 386 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-203ENST00000380877 WDFY2Q96P53 400 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 BARHL1Q9BZE3 327 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 DSPPQ9NZW4 1301 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 KIR2DS1A0A191URI9 304 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 CD3DP04234 171 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 TRAPPC2P0DI81 140 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 TRAPPC2BP0DI82 140 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 KIR2DS4P43632 304 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 KIR2DS1Q14954 304 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 TMPRSS7Q7RTY8 843 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 ZNF573Q86YE8 665 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 CD300LFQ8TDQ1 290 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 NKX3-1Q99801 234 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-203ENST00000380877 GHRLQ9UBU3 117 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 GNB3P16520 340 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 OPRM1P35372 400 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 LIMS1P48059 325 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 ACSM1Q08AH1 577 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 HAGHLQ6PII5 290 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-203ENST00000380877 ZDHHC23Q8IYP9 409 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 RDH5Q92781 318 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 CHRNA10Q9GZZ6 450 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
GABPB1-203ENST00000380877 A0A1B0GV50 99 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 H7C1Q1 480 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 HS3ST1O14792 307 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 TO15178 435 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 CELA2AP08217 269 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 EDDM3BP56851 147 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 MLF1P58340 268 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 CATR1Q13166 79 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 ZNF774Q6NX45 483 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 MAMSTRQ6ZN01 415 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 MFSD4AQ8N468 514 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 SLC38A9Q8NBW4 561 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 KISS1RQ969F8 398 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 RAB39BQ96DA2 213 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 SMIM3Q9BZL3 60 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 TGIF2Q9GZN2 237 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 AICDAQ9GZX7 198 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 RGCCQ9H4X1 137 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 SIX6O95475 246 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 TBX6O95947 436 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 APOC3P02656 99 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 LIFP15018 202 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 FABP6P51161 128 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 MGAT2Q10469 447 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 CDC20Q12834 499 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 PHLDA2Q53GA4 152 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 ARTNQ5T4W7 220 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 KIRREL1Q96J84 757 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 FYTTD1Q96QD9 318 aaKnown RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 EIF5A2Q9GZV4 153 aaKnown RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 TPT1P13693 172 aaKnown RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 HAAOP46952 286 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 EDDM3AQ14507 147 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 TFAP2EQ6VUC0 442 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 OR10R2Q8NGX6 335 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 POFUT1Q9H488 388 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 SDCBPO00560 298 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 OGG1O15527 345 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 ANGPTL7O43827 346 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 MMP15P51511 669 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 IGLV3-21P80748 117 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 ZNF169Q14929 603 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 GSG1Q2KHT4 349 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 SLC23A3Q6PIS1 610 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 CCDC28AQ8IWP9 274 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 TSNAXQ99598 290 aaKnown RBP10.92□□□□□ -0.66
GABPB1-203ENST00000380877 NUP50Q9UKX7 468 aa10.92□□□□□ -0.66
GABPB1-203ENST00000380877 SULT1C2O00338 296 aa10.91□□□□□ -0.66
GABPB1-203ENST00000380877 EFSO43281 561 aa10.91□□□□□ -0.66
GABPB1-203ENST00000380877 HLA-HP01893 362 aa10.91□□□□□ -0.66
GABPB1-203ENST00000380877 PATE4P0C8F1 98 aa10.91□□□□□ -0.66
GABPB1-203ENST00000380877 NFYAP23511 347 aaPredicted RBP10.91□□□□□ -0.66
GABPB1-203ENST00000380877 ECI1P42126 302 aa10.91□□□□□ -0.66
GABPB1-203ENST00000380877 RPL23AP62750 156 aaKnown RBP10.91□□□□□ -0.66
GABPB1-203ENST00000380877 OR8B8Q15620 311 aa10.91□□□□□ -0.66
GABPB1-203ENST00000380877 LSRQ86X29 649 aaPredicted RBP10.91□□□□□ -0.66
GABPB1-203ENST00000380877 MRPS18AQ9NVS2 196 aaKnown RBP10.91□□□□□ -0.66
GABPB1-203ENST00000380877 PLEKHB1Q9UF11 243 aaPredicted RBP10.91□□□□□ -0.66
GABPB1-203ENST00000380877 FAM221AA4D161 298 aa10.91□□□□□ -0.66
GABPB1-203ENST00000380877 AQP7P3A6NL99 342 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms