RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 FLYWCH2Q96CP2 140 aaKnown RBP11.27□□□□□ -0.6
CHD3-203ENST00000380358 A4GNTQ9UNA3 340 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 NME1P15531 152 aaKnown RBP11.27□□□□□ -0.6
CHD3-203ENST00000380358 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.6
CHD3-203ENST00000380358 CAMPP49913 170 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 ADPRHP54922 357 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 ZNF766Q5HY98 468 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 FNDC7Q5VTL7 733 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 TEX261Q6UWH6 196 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 NUDCD2Q8WVJ2 157 aa11.27□□□□□ -0.6
CHD3-203ENST00000380358 BCL9LQ86UU0 1499 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 TRBV23-1A0A0A0MS06 115 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 SOD1P00441 154 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 GFERP55789 205 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 C21orf58P58505 322 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 RPUSD3Q6P087 351 aaKnown RBP11.27□□□□□ -0.61
CHD3-203ENST00000380358 PGBD5Q8N414 524 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 SEH1LQ96EE3 360 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 SMIM7Q9BQ49 75 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 INPP5EQ9NRR6 644 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 NDRG4Q9ULP0 352 aaKnown RBP11.27□□□□□ -0.61
CHD3-203ENST00000380358 CNN1P51911 297 aaKnown RBP11.27□□□□□ -0.61
CHD3-203ENST00000380358 PIGPP57054 158 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 REEP5Q00765 189 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 PRSS35Q8N3Z0 413 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 MDC1Q14676 2089 aaKnown RBP11.27□□□□□ -0.61
CHD3-203ENST00000380358 SLIT2O94813 1529 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.61
CHD3-203ENST00000380358 SYT6Q5T7P8 510 aaPredicted RBP11.27□□□□□ -0.61
CHD3-203ENST00000380358 ZNF586Q9NXT0 402 aa11.27□□□□□ -0.61
CHD3-203ENST00000380358 SNRPGP62308 76 aaKnown RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 TRA2BP62995 288 aaKnown RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 CBLL1Q75N03 491 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 OR5D13Q8NGL4 314 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TAAR3PQ9P1P4 343 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 ST3GAL6Q9Y274 331 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 B3GALT5Q9Y2C3 310 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TRGV5A0A0B4J1U4 118 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 T-ENOLP0DO92 83 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 HRH1P35367 487 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 CSNK1DP48730 415 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 PNLIPRP2P54317 469 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 CSNK1G2P78368 415 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 VEZF1Q14119 521 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 OR1C1Q15619 314 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TNXAQ16473 311 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 XKR7Q5GH72 579 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 DLL4Q9NR61 685 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 BRWD1Q9NSI6 2320 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 GEMIN2O14893 280 aaKnown RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 HIST1H1CP16403 213 aaKnown RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 PDZK1IP1Q13113 114 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 ZNF620Q6ZNG0 422 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TAAR6Q96RI8 345 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TIMP4Q99727 224 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 ZNF696Q9H7X3 374 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TCFL5Q9UL49 500 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 PPIL1Q9Y3C6 166 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 U3KQ87 197 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 GPANK1O95872 356 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 CA6P23280 308 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 CEACAM6P40199 344 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 CDH26Q8IXH8 852 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 OR4F17Q8NGA8 305 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 SPACA9Q96E40 222 aaPredicted RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 PLEKHB1Q9UF11 243 aaPredicted RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 ACTL6AO96019 429 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 HPP00738 406 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 CD14P08571 375 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 FGF4P08620 206 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TEAD1P28347 426 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 CLEC9AQ6UXN8 241 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 GRINAQ7Z429 371 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 SLC38A9Q8NBW4 561 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 ZNF385DQ9H6B1 395 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 DNAJB5O75953 348 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 TCRBP04435 133 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 ALDOCP09972 364 aaKnown RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 FAHD2BQ6P2I3 314 aaPredicted RBP11.26□□□□□ -0.61
CHD3-203ENST00000380358 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 SIAH1Q8IUQ4 282 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 FAHD2AQ96GK7 314 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 PARD6AQ9NPB6 346 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 MMP17Q9ULZ9 603 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 FLVCR2Q9UPI3 526 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 PREX1Q8TCU6 1659 aa11.26□□□□□ -0.61
CHD3-203ENST00000380358 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ADAM10O14672 748 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 FURINP09958 794 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 ZNF121P58317 390 aaPredicted RBP11.25□□□□□ -0.61
CHD3-203ENST00000380358 ETFDHQ16134 617 aa11.25□□□□□ -0.61
CHD3-203ENST00000380358 SP6Q3SY56 376 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms