RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HRASP01112 189 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF574Q6ZN55 896 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CACNG8Q8WXS5 425 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CABLES2Q9BTV7 478 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SF3B6Q9Y3B4 125 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 OR4C45A6NMZ5 311 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ACTL6AO96019 429 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 IRF2P14316 349 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 RHBDD1Q8TEB9 315 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 EHFQ9NZC4 300 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MYOCOSA0A1B0GUC4 107 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 HIST1H1CP16403 213 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MEOX2P50222 304 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 UBE2NP61088 152 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CD84Q9UIB8 345 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 RHBDD2Q6NTF9 364 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 IL22RA1Q8N6P7 574 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MARS2Q96GW9 593 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 POFUT1Q9H488 388 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 OR2C1O95371 312 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 C18orf21Q32NC0 220 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM176BQ3YBM2 270 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 BBS1Q8NFJ9 593 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TMA7Q9Y2S6 64 aaKnown RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 PLPP3O14495 311 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 RAB9AP51151 201 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MADCAM1Q13477 382 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 P2RY6Q15077 328 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ACKR1Q16570 336 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM71Q6P5X7 295 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TRAPPC6BQ86SZ2 158 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ATG4DQ86TL0 474 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 NMNAT3Q96T66 252 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 AUP1Q9Y679 476 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 MFSD2BA6NFX1 497 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 DEDDO75618 318 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 SSX6Q7RTT6 188 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 CXCL16Q9H2A7 254 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 C21orf140B9A014 251 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 FNDC10F2Z333 226 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TMPRSS11DO60235 418 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 FCARP24071 287 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 UBE2V2Q15819 145 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 PMCHL1Q16048 86 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 ARSJQ5FYB0 599 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 LANCL3Q6ZV70 420 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 GCNT2Q8N0V5 402 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 PSMG3Q9BT73 122 aaPredicted RBP4.44□□□□□ -1.7
PCDH9-201ENST00000377861 PTGDR2Q9Y5Y4 395 aa4.44□□□□□ -1.7
PCDH9-201ENST00000377861 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 GPR31O00270 319 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SMIM10L1P0DMW3 83 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 AKIRIN2Q53H80 203 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SMIM10Q96HG1 83 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TAS2R16Q9NYV7 291 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SUSD5O60279 629 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 PIAS2O75928 621 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ASAH2BP0C7U1 165 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CAPZBP47756 277 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SMAD1Q15797 465 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SAMD13Q5VXD3 122 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 OSR2Q8N2R0 312 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF860A6NHJ4 632 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SULT1A2P50226 295 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ERVFC1P60507 584 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CLINT1Q14677 625 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 HFEQ30201 348 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ESX1Q8N693 406 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 OR4S1Q8NGB4 309 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ATP5SQ99766 215 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 BCL2L14Q9BZR8 327 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CST2P09228 141 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ENPP1P22413 925 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SSR4P51571 173 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TOR2AQ5JU69 321 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 C4orf45Q96LM5 186 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM167BQ9NRX6 74 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 HIDE1A8MVS5 230 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 IL2RAP01589 272 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CYB561P49447 251 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RNF222A6NCQ9 220 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CD300LBA8K4G0 201 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TGIF2LYQ8IUE0 185 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 GPR32P1Q8NGA4 272 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 FAM3CQ92520 227 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 UBE2FQ969M7 185 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 HSD17B10Q99714 261 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 NME1P15531 152 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RPS11P62280 158 aaKnown RBP eCLIP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 PRKRAO75569 313 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CD3DP04234 171 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 GALNT10Q86SR1 603 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 IGLV3-32A0A0A0MS00 114 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 LRRC73Q5JTD7 316 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 FAM69BQ5VUD6 431 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM255BQ8WV15 326 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TMEM210A6NLX4 147 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 IL3RAP26951 378 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ZFP36L2P47974 494 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 FNTBP49356 437 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms