RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 GK2Q14410 553 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-203ENST00000377344 Q499Y3 187 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 C22orf42Q6IC83 251 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 VHLLQ6RSH7 139 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 PGAP1Q75T13 922 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 ANKRD13BQ86YJ7 626 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 BCL2L14Q9BZR8 327 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 OR2J1Q9GZK6 312 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 PLEKHA1Q9HB21 404 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 ENPP5Q9UJA9 477 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 ZNF391Q9UJN7 358 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 POU2F3Q9UKI9 436 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 FLNCQ14315 2725 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-203ENST00000377344 A6NIN4 97 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 ZNF879B4DU55 563 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 PRSS44E7EML9 344 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 LMX1BO60663 402 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 MTRF1O75570 445 aaKnown RBP11.16□□□□□ -0.62
CBWD3-203ENST00000377344 EPXP11678 715 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 CFL1P23528 166 aaKnown RBP11.16□□□□□ -0.62
CBWD3-203ENST00000377344 BEX5Q5H9J7 111 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 ZMAT1Q5H9K5 638 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 NCMAPQ5T1S8 102 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 ADAM5Q6NVV9 412 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 SLC16A12Q6ZSM3 486 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 SLC25A40Q8TBP6 338 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 TMEM106AQ96A25 262 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 PIK3IP1Q96FE7 263 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 TRMT61AQ96FX7 289 aaKnown RBP11.16□□□□□ -0.62
CBWD3-203ENST00000377344 CEPT1Q9Y6K0 416 aa11.16□□□□□ -0.62
CBWD3-203ENST00000377344 TRBV5-5A0A0J9YX44 114 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 SMIM31A0A1B0GVY4 71 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 TRDV1A0A1B0GX56 115 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 GGT3PA6NGU5 568 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 DHRS3O75911 302 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 CD2P06729 351 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 CD3EP07766 207 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 ZNF20P17024 532 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 CCL1P22362 96 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 MAPK3P27361 379 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-203ENST00000377344 GNALP38405 381 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 FAM3AP98173 230 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 FAM27D1Q5T7N8 215 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 CD200R1LQ6Q8B3 271 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 DMRTC2Q8IXT2 367 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-203ENST00000377344 SPSB4Q96A44 273 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 ISOC1Q96CN7 298 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 ORAI1Q96D31 301 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 CENPOQ9BU64 300 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 RNF167Q9H6Y7 350 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 TXNL4BQ9NX01 149 aaKnown RBP11.15□□□□□ -0.62
CBWD3-203ENST00000377344 NDUFA13Q9P0J0 144 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 FZR1Q9UM11 496 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 GSTK1Q9Y2Q3 226 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 ATP23Q9Y6H3 246 aa11.15□□□□□ -0.62
CBWD3-203ENST00000377344 HEATR1Q9H583 2144 aaKnown RBP11.15□□□□□ -0.63
CBWD3-203ENST00000377344 GATBO75879 557 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 GABARAPO95166 117 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 IGLV3-1P01715 115 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF12P17014 697 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 CALRP27797 417 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 GCH1P30793 250 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 TGFBR1P36897 503 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 MAP2K3P46734 347 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 GSK3AP49840 483 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 FABP6P51161 128 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 TMBIM6P55061 237 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 VBP1P61758 197 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 RGS7BPQ6MZT1 257 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 MEX3BQ6ZN04 569 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 BHLHE23Q8NDY6 225 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 RAB2BQ8WUD1 216 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 FGGYQ96C11 551 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 CMBLQ96DG6 245 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 DERL3Q96Q80 235 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 REPIN1Q9BWE0 567 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 OPA3Q9H6K4 179 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 NOX4Q9NPH5 578 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF275Q9NSD4 429 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 PIGLQ9Y2B2 252 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 KLF2Q9Y5W3 355 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 SPTBN1Q01082 2364 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 hCG_38984A0A1B0GV85 526 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 A1L4Q6 167 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 ANKRD61A6NGH8 418 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 SC5DO75845 299 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 FAHP16930 419 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 NCS1P62166 190 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 RPS23P62266 143 aaKnown RBP11.14□□□□□ -0.63
CBWD3-203ENST00000377344 RIPPLY1Q0D2K3 151 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 CTF1Q16619 201 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 ZNF718Q3SXZ3 478 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 PAMR1Q6UXH9 720 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 GDPGP1Q6ZNW5 385 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 C1orf174Q8IYL3 243 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
CBWD3-203ENST00000377344 OR14K1Q8NGZ2 314 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms