RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PIGPP57054 158 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 MENTQ9BUN1 341 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 ACOXLQ9NUZ1 547 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 KIR3DX1Q9H7L2 352 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 TSC2P49815 1807 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 A0A1W2PPQ1 181 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 TRIM77I1YAP6 450 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 POU2F2P09086 479 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 MOGAT2Q3SYC2 334 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 OR2A25A4D2G3 310 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 DDOSTP39656 456 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 TM4SF18Q96CE8 201 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 C1QTNF3Q9BXJ4 246 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 IAPPP10997 89 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 TAS1R1Q7RTX1 841 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 YRDCQ86U90 279 aaKnown RBP11.35□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF785A8K8V0 405 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF354AO60765 605 aaPredicted RBP11.35□□□□□ -0.59
VPS13A-204ENST00000376634 NHSL2Q5HYW2 709 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 GABRG1Q8N1C3 465 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 LRRC15Q8TF66 581 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 JAM3Q9BX67 310 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 TMEM129A0AVI4 362 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 CLEC18AA5D8T8 446 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 CLEC18CQ8NCF0 446 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 C1QTNF6Q9BXI9 259 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 GPR84Q9NQS5 396 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 HCFC2Q9Y5Z7 792 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 HS3ST3A1Q9Y663 406 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 GUSBP08236 651 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 PSMB6P28072 239 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF385BQ569K4 471 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 LCN15Q6UWW0 184 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
VPS13A-204ENST00000376634 PPP6CO00743 305 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 DUS4LO95620 317 aaKnown RBP11.35□□□□□ -0.59
VPS13A-204ENST00000376634 COMMD1Q8N668 190 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 TOLLIPQ9H0E2 274 aa11.35□□□□□ -0.59
VPS13A-204ENST00000376634 GBF1Q92538 1859 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 QDPRP09417 244 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 FAM157BP0CG42 384 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 SSBP1Q04837 148 aaKnown RBP11.34□□□□□ -0.59
VPS13A-204ENST00000376634 NCR3LG1Q68D85 454 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 DND1Q8IYX4 353 aaKnown RBP11.34□□□□□ -0.59
VPS13A-204ENST00000376634 EGLN2Q96KS0 407 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 PLEKHA2Q9HB19 425 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 CCSO14618 274 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 WDR31Q8NA23 367 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 SLC35B4Q969S0 331 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 EDEM2Q9BV94 578 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 HELZP42694 1942 aaKnown RBP11.34□□□□□ -0.59
VPS13A-204ENST00000376634 PLXND1Q9Y4D7 1925 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 ACKR1Q16570 336 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 BCORP1Q8N888 145 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 T-ENOLP0DO92 83 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 OXA1LQ15070 435 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 SLAMF6Q96DU3 332 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 PSENENQ9NZ42 101 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 KLF13Q9Y2Y9 288 aaPredicted RBP11.34□□□□□ -0.59
VPS13A-204ENST00000376634 IGKV6D-21A0A0A0MT36 114 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 SDHAP31040 664 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 CD80P33681 288 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 ASAH1Q13510 395 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 LRRC26Q2I0M4 334 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 ABI3BPQ7Z7G0 1075 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 CSNK1G2P78368 415 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 CEBPEQ15744 281 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 TMEM88Q6PEY1 159 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 OR51E1Q8TCB6 317 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 C1QBP02746 253 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF561Q8N587 486 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 SMIM19Q96E16 107 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 PIAS2O75928 621 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 MMP7P09237 267 aaPredicted RBP11.34□□□□□ -0.59
VPS13A-204ENST00000376634 TMPRSS11FQ6ZWK6 438 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 PECRQ9BY49 303 aa11.34□□□□□ -0.59
VPS13A-204ENST00000376634 XRCC2O43543 280 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 HPP00738 406 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 NAGKQ9UJ70 344 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 TRAV20A0A0B4J274 112 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 DSCR3O14972 297 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 OR2J2O76002 312 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 ZNF528Q3MIS6 628 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 TMEM268Q5VZI3 342 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 OR5M11Q96RB7 305 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 SEBOXQ9HB31 216 aaPredicted RBP11.33□□□□□ -0.6
VPS13A-204ENST00000376634 ZNF320A2RRD8 509 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 PLXNB1O43157 2135 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 CD27P26842 260 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 OR5AP2Q8NGF4 316 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 FAM24AA6NFZ4 105 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 CRXO43186 299 aaPredicted RBP11.33□□□□□ -0.6
VPS13A-204ENST00000376634 HIST1H1CP16403 213 aaKnown RBP11.33□□□□□ -0.6
VPS13A-204ENST00000376634 PIGAP37287 484 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 EMC6Q9BV81 110 aa11.33□□□□□ -0.6
VPS13A-204ENST00000376634 CHST6Q9GZX3 395 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms