RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CAMKMTQ7Z624 323 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 GLCCI1Q86VQ1 547 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 ANKRD53Q8N9V6 530 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 ANGPTL6Q8NI99 470 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SMIM4Q8WVI0 70 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SLC35E1Q96K37 410 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SMIM7Q9BQ49 75 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TMPRSS5Q9H3S3 457 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 PIKFYVEQ9Y2I7 2098 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 H0YIG0 161 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 AQP7O14520 342 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 MBP02144 154 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 NKAIN1Q4KMZ8 207 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 FAM162BQ5T6X4 162 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 CORO2AQ92828 525 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 ATF6BQ99941 703 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 GINS3Q9BRX5 216 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 FAM103A1Q9BTL3 118 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 IKZF5Q9H5V7 419 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 CHST11Q9NPF2 352 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 CTSFQ9UBX1 484 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 A0A0B4J203 849 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SDCBPO00560 298 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 CHEK1O14757 476 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 GLI4P10075 376 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TGM1P22735 817 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 KIR2DL3P43628 341 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 CLLU1Q5K131 121 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 ATOH1Q92858 354 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TRIOO75962 3097 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 HS3ST1O14792 307 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 MOSPD3O75425 235 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TMEM11P17152 192 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 ZP3P21754 424 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 HRH1P35367 487 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 TAS2R45P59539 299 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 SUMO1P63165 101 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 C4orf17Q53FE4 359 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 CCDC190Q86UF4 302 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 ARIH2OSQ8N7S6 290 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 RXFP4Q8TDU9 374 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 PPP1R1CQ8WVI7 109 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 BCL2L10Q9HD36 194 aa11.12□□□□□ -0.63
NPLOC4-202ENST00000374747 RAB27BO00194 218 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 DEFA4P12838 97 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 DCTDP32321 178 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 DRD3P35462 400 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 ACKR1Q16570 336 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 OR51F2Q8NH61 342 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 MAP6Q96JE9 813 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 RTL8AQ9BWD3 113 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 POMT2Q9UKY4 750 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 ZNF346Q9UL40 294 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 LRP3O75074 770 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 ETHE1O95571 254 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 F10P00742 488 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 CT45A10P0DMU9 189 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 SPNP16150 400 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 TCN2P20062 427 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 VAMP3Q15836 100 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 CTF1Q16619 201 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 ACOT6Q3I5F7 207 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 OR2T2Q6IF00 324 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 OR10P1Q8NGE3 313 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 IFI44Q8TCB0 444 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 RIMS4Q9H426 269 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 MMP15P51511 669 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 FBXL6Q8N531 539 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 EXD3Q8N9H8 876 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 MARCH1Q8TCQ1 289 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 EMC6Q9BV81 110 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 NRSN2Q9GZP1 204 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 DUSP13Q9UII6 198 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 TSC2P49815 1807 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 ANKRD61A6NGH8 418 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 CLEC3BP05452 202 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 GRPP07492 148 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 SPP1P10451 314 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 NCR3LG1Q68D85 454 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 RNF165Q6ZSG1 346 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 NT5CQ8TCD5 201 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 OR2A14Q96R47 310 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 IER2Q9BTL4 223 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 JAM3Q9BX67 310 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 SCN10AQ9Y5Y9 1956 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
NPLOC4-202ENST00000374747 GPR3P46089 330 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 RANP62826 216 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 FAM53BQ14153 422 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 PCK2Q16822 640 aa11.1□□□□□ -0.63
NPLOC4-202ENST00000374747 BHLHE23Q8NDY6 225 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms