RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 DUX4L6P0CJ89 424 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DUX4L7P0CJ90 424 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 HIST1H1EP10412 219 aaKnown RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 CCL5P13501 91 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 RAB38P57729 211 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 HBA1P69905 142 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 PRKCDQ05655 676 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DLX2Q07687 328 aaPredicted RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 TTLL9Q3SXZ7 439 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 ATP6AP1LQ52LC2 224 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 SCD5Q86SK9 330 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 ACOT1Q86TX2 421 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 PARGQ86W56 976 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 PELI3Q8N2H9 469 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 M1APQ8TC57 530 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 LINC01599Q8WXQ3 324 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 ZNF488Q96MN9 340 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 GINS4Q9BRT9 223 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DUS2Q9NX74 493 aaKnown RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 THYN1Q9P016 225 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 DUX4Q9UBX2 424 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 PRODH2Q9UF12 536 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 ZNF107Q9UII5 783 aaPredicted RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 MTCH2Q9Y6C9 303 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 SCN1AP35498 2009 aa7.04□□□□□ -1.28
USP48-203ENST00000374732 CHD3Q12873 2000 aaKnown RBP7.04□□□□□ -1.28
USP48-203ENST00000374732 LOC105369274A0A096LPK9 316 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 LOC102723532A0A0G2JNH3 316 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 SMIM28A0A1B0GU29 152 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 NPIPB5A8MRT5 1133 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 HIDE1A8MVS5 230 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 FCGR3BO75015 233 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 NKX2-2O95096 273 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 MPC1LP0DKB6 136 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 OR5H8P0DN80 308 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 PSG1P11464 419 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 FAHP16930 419 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 GLYR1Q49A26 553 aaPredicted RBP7.03□□□□□ -1.28
USP48-203ENST00000374732 C6orf226Q5I0X4 101 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 WIPI1Q5MNZ9 446 aaPredicted RBP7.03□□□□□ -1.28
USP48-203ENST00000374732 GLYATQ6IB77 296 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 FAM71F2Q6NXP2 309 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 H3F3CQ6NXT2 135 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 OR4N4Q8N0Y3 316 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 OR56B4Q8NH76 319 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 OR1S1Q8NH92 325 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 C20orf144Q9BQM9 153 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 RDH14Q9HBH5 336 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 FTCDNL1E5RQL4 147 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 SCG5P05408 212 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 HPNP05981 417 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 CT62P0C5K7 136 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 GZMBP10144 247 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 TIA1P31483 386 aaKnown RBP eCLIP7.03□□□□□ -1.286e-10■■■■□ 26.6
USP48-203ENST00000374732 CCKBRP32239 447 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 GLRXP35754 106 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 TAF6P49848 677 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 GEMP55040 296 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 MGAT2Q10469 447 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 POU2AF1Q16633 256 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 DPY19L1Q2PZI1 675 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 SPATA31B1PQ5VZV4 182 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 ZNF773Q6PK81 442 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 PNPLA1Q8N8W4 532 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 RELL2Q8NC24 303 aaPredicted RBP7.03□□□□□ -1.28
USP48-203ENST00000374732 LOXL4Q96JB6 756 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 TSSK2Q96PF2 358 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 H2AFJQ9BTM1 129 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 SNRNP25Q9BV90 132 aaKnown RBP7.03□□□□□ -1.28
USP48-203ENST00000374732 NMNAT2Q9BZQ4 307 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 VN1R1Q9GZP7 353 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 GLYATL1P3A0A0U1RQE8 302 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 UBE2QL1A1L167 161 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 PRSS38A1L453 326 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 NKX2-6A6NCS4 301 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 FGF16O43320 207 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 TMPRSS11DO60235 418 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 UMODP07911 640 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 C1QTNF9P0C862 333 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 ZBTB25P24278 435 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 ITGB7P26010 798 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 PIGAP37287 484 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 CD69Q07108 199 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 P2RY6Q15077 328 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 RAB35Q15286 201 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 PWWP2BQ6NUJ5 590 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 ADAM5Q6NVV9 412 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 CD300LDQ6UXZ3 194 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 TMEM130Q8N3G9 435 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 SPICQ8N5J4 248 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 SMAP2Q8WU79 429 aaPredicted RBP7.03□□□□□ -1.28
USP48-203ENST00000374732 NAT6Q93015 286 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 ERMAPQ96PL5 475 aaPredicted RBP7.03□□□□□ -1.28
USP48-203ENST00000374732 PAK1IP1Q9NWT1 392 aaPredicted RBP7.03□□□□□ -1.28
USP48-203ENST00000374732 OPTCQ9UBM4 332 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 FBLN5Q9UBX5 448 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 TCF19Q9Y242 345 aa7.03□□□□□ -1.28
USP48-203ENST00000374732 CENPVL1A0A0U1RR11 272 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms