RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 IL2RAP01589 272 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 GSTP1P09211 210 aaKnown RBP12.35□□□□□ -0.43
HMGCL-203ENST00000374490 VSIG8P0DPA2 414 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 SLC25A4P12235 298 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF28P17035 718 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 ZP3P21754 424 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 CCL1P22362 96 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF93P35789 620 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-203ENST00000374490 EIF1AXP47813 144 aaKnown RBP12.35□□□□□ -0.43
HMGCL-203ENST00000374490 TAS2R31P59538 309 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 GABREP78334 506 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 SORDQ00796 357 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 DHRS2Q13268 280 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF345Q14585 488 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 SCGB2B2Q4G0G5 96 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 AWAT2Q6E213 333 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 OR10K2Q6IF99 312 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 RGS7BPQ6MZT1 257 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-203ENST00000374490 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 BEST3Q8N1M1 668 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 CHST4Q8NCG5 386 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 OR10G3Q8NGC4 313 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 OR10R2Q8NGX6 335 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 RELTQ969Z4 430 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 GAL3ST1Q99999 423 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 WDR54Q9H977 334 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 COMMD9Q9P000 198 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 GPN3Q9UHW5 284 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-203ENST00000374490 LHFPL6Q9Y693 200 aa12.35□□□□□ -0.43
HMGCL-203ENST00000374490 EXPH5Q8NEV8 1989 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 LOC101059948A0A1B0GTJ6 334 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 OR14I1A6ND48 311 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 MFSD2BA6NFX1 497 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 AQP7P3A6NL99 342 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 MEN1O00255 615 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 DKK1O94907 266 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 OR2F2O95006 317 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 NMBP08949 121 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 CD59P13987 128 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 MGMTP16455 207 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF43P17038 809 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 FOXL2P58012 376 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 UBE2MP61081 183 aaKnown RBP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 CXADRP78310 365 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 UNC119Q13432 240 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 TRA2AQ13595 282 aaKnown RBP eCLIP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 OR2F1Q13607 317 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 TRIP6Q15654 476 aaKnown RBP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 HIST3H3Q16695 136 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 LY6G6FQ5SQ64 297 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 CFAP77Q6ZQR2 320 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 DOK3Q7L591 496 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 PAQR4Q8N4S7 273 aaPredicted RBP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 CCDC54Q8NEL0 328 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 OR13C9Q8NGT0 318 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 NKD1Q969G9 470 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 WDR89Q96FK6 387 aaPredicted RBP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 OR5B2Q96R09 309 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 RASL10BQ96S79 203 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 NKX3-1Q99801 234 aaPredicted RBP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 SEC61A2Q9H9S3 476 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 SDHAF2Q9NX18 166 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 FARSAQ9Y285 508 aaKnown RBP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 NOP16Q9Y3C1 178 aaKnown RBP12.34□□□□□ -0.43
HMGCL-203ENST00000374490 CEP295Q9C0D2 2601 aa12.34□□□□□ -0.43
HMGCL-203ENST00000374490 LOC102723996A0A087X1L8 192 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 TRAV14DV4A0A0A6YYC5 116 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 KRBOX1C9JBD0 128 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 FCER2P06734 321 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 ZBTB25P24278 435 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 MPGP29372 298 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 CBX5P45973 191 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.43
HMGCL-203ENST00000374490 PNLIPRP3Q17RR3 467 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 MRPL14Q6P1L8 145 aaKnown RBP12.33□□□□□ -0.43
HMGCL-203ENST00000374490 PDZD9Q8IXQ8 264 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 KCNG3Q8TAE7 436 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 OR51E1Q8TCB6 317 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 ELP5Q8TE02 316 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 RHBDD1Q8TEB9 315 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 PHB2Q99623 299 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 REG4Q9BYZ8 158 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 SLC25A32Q9H2D1 315 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 NARFLQ9H6Q4 476 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 ANAPC10Q9UM13 185 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 LHX6Q9UPM6 363 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 MRPS28Q9Y2Q9 187 aaKnown RBP12.33□□□□□ -0.43
HMGCL-203ENST00000374490 HRH3Q9Y5N1 445 aa12.33□□□□□ -0.43
HMGCL-203ENST00000374490 NTN3O00634 580 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-203ENST00000374490 STK17BO94768 372 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 HLA-AP01891 365 aaKnown RBP12.33□□□□□ -0.44
HMGCL-203ENST00000374490 IFNA6P05013 189 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 GP1BAP07359 652 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 FGF5P12034 268 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 CTSSP25774 331 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 LSM6P62312 80 aaKnown RBP12.33□□□□□ -0.44
HMGCL-203ENST00000374490 FOXK1P85037 733 aa12.33□□□□□ -0.44
HMGCL-203ENST00000374490 SFRP5Q5T4F7 317 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms