RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 OR2G2Q8NGZ5 317 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 THRSPQ92748 146 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 ZFP3Q96NJ6 502 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 SLC25A32Q9H2D1 315 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 ZGRF1Q86YA3 2104 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 FAM74A7A6NL05 159 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 PLGP00747 810 aaPredicted RBP12.63□□□□□ -0.39
HMGA1-203ENST00000374116 IL5P05113 134 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 IFNGR1P15260 489 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 DPP4P27487 766 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 APOBEC1P41238 236 aaKnown RBP12.63□□□□□ -0.39
HMGA1-203ENST00000374116 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 HES5Q5TA89 166 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 STAC2Q6ZMT1 411 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 CMTM4Q8IZR5 234 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 DNAJA3Q96EY1 480 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
HMGA1-203ENST00000374116 OR11A1Q9GZK7 315 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 MGAT4CQ9UBM8 478 aa12.63□□□□□ -0.39
HMGA1-203ENST00000374116 IGLV1-36A0A0B4J1U3 117 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ANXA2P2A6NMY6 339 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SLC16A7O60669 478 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 HLA-DQA2P01906 255 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 MSX1P28360 303 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 DGCR2P98153 550 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 TLE1Q04724 770 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ZP4Q12836 540 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 LRRN1Q6UXK5 716 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF704Q6ZNC4 412 aaPredicted RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF676Q8N7Q3 588 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF417Q8TAU3 575 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 GPR148Q8TDV2 347 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SMIM4Q8WVI0 70 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 LRRC46Q96FV0 321 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 OR8B4Q96RC9 309 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF587Q96SQ5 575 aaPredicted RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ESRP2Q9H6T0 727 aaKnown RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SDHAF3Q9NRP4 125 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 BAHCC1Q9P281 2608 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 RP1L1Q8IWN7 2480 aaPredicted RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 A6NIZ1 184 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ACOT7O00154 380 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF208O43345 1280 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 CBR3O75828 277 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 TOXO94900 526 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 GPANK1O95872 356 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 APOC3P02656 99 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 CD3GP09693 182 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 POU3F2P20265 443 aaPredicted RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 CRABP1P29762 137 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 MAGEB1P43366 347 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 CCR6P51684 374 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 CCR9P51686 369 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 RAP1BP61224 184 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 RAP1AP62834 184 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SNTB2Q13425 540 aaKnown RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 SLC17A1Q14916 467 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF324BQ6AW86 544 aaPredicted RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 GLDNQ6ZMI3 551 aaPredicted RBP12.62□□□□□ -0.39
HMGA1-203ENST00000374116 TMEM17Q86X19 198 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 FADS6Q8N9I5 356 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 OR1M1Q8NGA1 313 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 MFSD8Q8NHS3 518 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 COQ8AQ8NI60 647 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 RAB40AQ8WXH6 277 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ASB13Q8WXK3 278 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 C4orf45Q96LM5 186 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 KCNG2Q9UJ96 466 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 DKKL1Q9UK85 242 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ETV7Q9Y603 341 aa12.62□□□□□ -0.39
HMGA1-203ENST00000374116 ALPK2Q86TB3 2170 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 ZIC3O60481 467 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 PLATP00750 562 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 CRYABP02511 175 aaKnown RBP12.61□□□□□ -0.39
HMGA1-203ENST00000374116 OPN1LWP04000 364 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
HMGA1-203ENST00000374116 HAAOP46952 286 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 SOX2P48431 317 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 SCAND1P57086 179 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 ROM1Q03395 351 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 SLC10A1Q14973 349 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 FAM209BQ5JX69 171 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 KCTD18Q6PI47 426 aaPredicted RBP12.61□□□□□ -0.39
HMGA1-203ENST00000374116 Q6ZTK2 550 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 ESPNLQ6ZVH7 1005 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 TMUB2Q71RG4 321 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 FCRLAQ7L513 359 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 LRRTM1Q86UE6 522 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF679Q8IYX0 411 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 PRSS35Q8N3Z0 413 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 BEST4Q8NFU0 473 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 DMBX1Q8NFW5 382 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 OR14L1PQ8NHC6 308 aa12.61□□□□□ -0.39
HMGA1-203ENST00000374116 INTS12Q96CB8 462 aaKnown RBP12.61□□□□□ -0.39
HMGA1-203ENST00000374116 SLC25A38Q96DW6 304 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms