RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TMEM102Q8N9M5 508 aaPredicted RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 SMIM7Q9BQ49 75 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 AKAP11Q9UKA4 1901 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 SHISA8B8ZZ34 492 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 DDOSTP39656 456 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 TMEM88Q6PEY1 159 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 PLXDC2Q6UX71 529 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 GRINAQ7Z429 371 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 RBM14Q96PK6 669 aaKnown RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 CSF3RQ99062 836 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 CABLES2Q9BTV7 478 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 NXF2Q9GZY0 626 aaKnown RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 WNT16Q9UBV4 365 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 CCDC187A0A096LP49 1063 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 OR2A25A4D2G3 310 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 CELA2BP08218 269 aaPredicted RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 SLCO4A1Q96BD0 722 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 ARHGDIGQ99819 225 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 TRIM77I1YAP6 450 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 IGLV3-25P01717 112 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 FAM219BQ5XKK7 198 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 OR52N1Q8NH53 320 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 GPR119Q8TDV5 335 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 C1QTNF3Q9BXJ4 246 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 YTHDF2Q9Y5A9 579 aaKnown RBP12.97□□□□□ -0.33
TRAF1-201ENST00000373887 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
TRAF1-201ENST00000373887 BMPR1BO00238 502 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 LRP3O75074 770 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 DHRS7BQ6IAN0 325 aaPredicted RBP12.96□□□□□ -0.33
TRAF1-201ENST00000373887 SLAMF6Q96DU3 332 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 SLC25A32Q9H2D1 315 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 GPR31O00270 319 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 MT-CO3P00414 261 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 TBXA2RP21731 343 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 ACHEP22303 614 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 TRIP6Q15654 476 aaKnown RBP12.96□□□□□ -0.33
TRAF1-201ENST00000373887 SLC38A9Q8NBW4 561 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 C16orf52Q8NHV5 167 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 MED30Q96HR3 178 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 NARFLQ9H6Q4 476 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 UCK1Q9HA47 277 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 SPRED2Q7Z698 418 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 CPEB3Q8NE35 698 aaKnown RBP12.96□□□□□ -0.33
TRAF1-201ENST00000373887 OR52N5Q8NH56 324 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 OLIG1Q8TAK6 271 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 TECTBQ96PL2 329 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 CBY1Q9Y3M2 126 aa12.96□□□□□ -0.33
TRAF1-201ENST00000373887 GIPP09681 153 aaPredicted RBP12.96□□□□□ -0.34
TRAF1-201ENST00000373887 RPL12P30050 165 aaKnown RBP12.96□□□□□ -0.34
TRAF1-201ENST00000373887 NCR3LG1Q68D85 454 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 KIAA1958Q8N8K9 716 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 OR5AP2Q8NGF4 316 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 PARD6AQ9NPB6 346 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 FBXO34Q9NWN3 711 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 TFAP2AP05549 437 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF17P17021 662 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 HOXC8P31273 242 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 OR2T2Q6IF00 324 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 TMPRSS11FQ6ZWK6 438 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 GABRG1Q8N1C3 465 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 ACY3Q96HD9 319 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 TEX101Q9BY14 249 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 STRAPQ9Y3F4 350 aaKnown RBP12.96□□□□□ -0.34
TRAF1-201ENST00000373887 DOCK1Q14185 1865 aa12.96□□□□□ -0.34
TRAF1-201ENST00000373887 ZNF785A8K8V0 405 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 GFYI3L273 518 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 JTBO76095 146 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 FUCA1P04066 466 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 TRAPPC2P0DI81 140 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 TRAPPC2BP0DI82 140 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 EMDP50402 254 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 ANKRD34AQ69YU3 496 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 LHFPL2Q6ZUX7 228 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 NANOGP1Q8N7R0 232 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 SLC25A46Q96AG3 418 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 OPALINQ96PE5 141 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 PPM1DO15297 605 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 FABP4P15090 132 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 LAIR1Q6GTX8 287 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 APOBEC1P41238 236 aaKnown RBP12.95□□□□□ -0.34
TRAF1-201ENST00000373887 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 ASH2LQ9UBL3 628 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 MYO5AQ9Y4I1 1855 aaKnown RBP12.95□□□□□ -0.34
TRAF1-201ENST00000373887 MYO7AQ13402 2215 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 FAM90A27PA6NNH2 459 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 HMGN4O00479 90 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
TRAF1-201ENST00000373887 LIPNQ5VXI9 398 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 PAQR6Q6TCH4 344 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 ERGIC1Q969X5 290 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 UBE2L5PA0A1B0GUS4 154 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 LMO7DNF2Z398 122 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 TAAR5O14804 337 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 CHRM2P08172 466 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 CD22P20273 847 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 NUDCD2Q8WVJ2 157 aa12.95□□□□□ -0.34
TRAF1-201ENST00000373887 GNPNAT1Q96EK6 184 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms