RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TRAV36DV7A0A075B6V5 113 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 MBTPS2O43462 519 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 NUDT21O43809 227 aaKnown RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 CAV2P51636 162 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 S100A10P60903 97 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 PHF19Q5T6S3 580 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 CLEC18BQ6UXF7 455 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 ZNF101Q8IZC7 436 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 OR13C9Q8NGT0 318 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 AKR1E2Q96JD6 320 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 NMES1Q9C002 83 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 C5orf66Q9H5L9 145 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 ZNF823P16415 610 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 IL11P20809 199 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 NAAAQ02083 359 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 RAB32Q13637 225 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 FBXO46Q6PJ61 603 aaPredicted RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 IL34Q6ZMJ4 242 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 Q6ZSR6 202 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 PPP1R3BQ86XI6 285 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 ANGPTL5Q86XS5 388 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 ZNF565Q8N9K5 539 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 OR10H5Q8NGA6 315 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 GPR119Q8TDV5 335 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 ADAT3Q96EY9 351 aaPredicted RBP12.2□□□□□ -0.46
USP49-201ENST00000373006 PRODH2Q9UF12 536 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 RHBDD3Q9Y3P4 386 aa12.2□□□□□ -0.46
USP49-201ENST00000373006 TRBV6-7A0A0A0MS04 114 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 A0A1W2PQF6 199 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 MED19A0JLT2 244 aaPredicted RBP12.19□□□□□ -0.46
USP49-201ENST00000373006 IL33O95760 270 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 NDUFB7P17568 137 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 NTSR1P30989 418 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 GPX4P36969 197 aaPredicted RBP12.19□□□□□ -0.46
USP49-201ENST00000373006 TMEM128Q5BJH2 165 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 FAM76BQ5HYJ3 339 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 FAHD2BQ6P2I3 314 aaPredicted RBP12.19□□□□□ -0.46
USP49-201ENST00000373006 LYPD6Q86Y78 171 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 MISPQ8IVT2 679 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 TMEM230Q96A57 120 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 FAHD2AQ96GK7 314 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 ASXL3Q9C0F0 2248 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 H7C1Q1 480 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 ZNF217O75362 1048 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 SRSF10O75494 262 aaKnown RBP12.19□□□□□ -0.46
USP49-201ENST00000373006 HOXB5P09067 269 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 ZNF44P15621 663 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 G0S2P27469 103 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 CX3CR1P49238 355 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 RAB2AP61019 212 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 AWAT2Q6E213 333 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 HOGA1Q86XE5 327 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 STX12Q86Y82 276 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 WDFY1Q8IWB7 410 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 PTPMT1Q8WUK0 201 aaPredicted RBP12.19□□□□□ -0.46
USP49-201ENST00000373006 SULT4A1Q9BR01 284 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 TXNIPQ9H3M7 391 aa12.19□□□□□ -0.46
USP49-201ENST00000373006 LOC390937A0A1W2PQ73 354 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 WRBO00258 174 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 HEXAP06865 529 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 ITGA3P26006 1051 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 SLC37A1P57057 533 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 IGLV3-21P80748 117 aaPredicted RBP12.18□□□□□ -0.46
USP49-201ENST00000373006 CYCSP99999 105 aaKnown RBP12.18□□□□□ -0.46
USP49-201ENST00000373006 HHEXQ03014 270 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 SGCBQ16585 318 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 ANKRD55Q3KP44 614 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 DHRS11Q6UWP2 260 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 DRAM2Q6UX65 266 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 C19orf47Q8N9M1 422 aaKnown RBP12.18□□□□□ -0.46
USP49-201ENST00000373006 TMEM104Q8NE00 496 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 AKR7LQ8NHP1 331 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 TMEM41AQ96HV5 264 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 BANF2Q9H503 90 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 PDE7BQ9NP56 450 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 IGKV1D-43A0A0B4J1Z2 117 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 A0A1W2PP11 408 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 A0A1W2PPH5 198 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 H0YIG0 161 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 SDCBPO00560 298 aaPredicted RBP12.18□□□□□ -0.46
USP49-201ENST00000373006 SFTPBP07988 381 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 CD37P11049 281 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 RAB6AP20340 208 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 EMP2P54851 167 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 PNLIPRP3Q17RR3 467 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 FAM24BQ8N5W8 94 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 OR13H1Q8NG92 308 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 ADAMTS17Q8TE56 1095 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 POM121Q96HA1 1249 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 TAF9BQ9HBM6 251 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 SDHAF3Q9NRP4 125 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 SOCS1O15524 211 aa12.18□□□□□ -0.46
USP49-201ENST00000373006 S100A8P05109 93 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms