RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 BLVRBP30043 206 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CHRNA7P36544 502 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 PGFP49763 221 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 CLDN12P56749 244 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 YOD1Q5VVQ6 348 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 LHFPL5Q8TAF8 219 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 PLSCR3Q9NRY6 295 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 MTCH2Q9Y6C9 303 aa12.79□□□□□ -0.36
RAPGEF1-202ENST00000372190 GYPAP02724 150 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 SHC1P29353 583 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 PAX5Q02548 391 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 DPTQ07507 201 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 SAMD13Q5VXD3 122 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 METRNLQ641Q3 311 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 SYT9Q86SS6 491 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ABHD4Q8TB40 342 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM43Q9BTV4 400 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 LPAR5Q9H1C0 372 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 MRPS28Q9Y2Q9 187 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 TRDV1A0A1B0GX56 115 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 CSO75390 466 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 BPIFB3P59826 476 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 LTB4RQ15722 352 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 FRMPD2BQ6IN97 320 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ANKRD16Q6P6B7 361 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 IP6K3Q96PC2 410 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 TEAD3Q99594 435 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR51B6Q9H340 312 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 C11orf68Q9H3H3 251 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 MED17Q9NVC6 651 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 KIAA0100Q14667 2235 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 CDS2O95674 445 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 TAS2R60P59551 318 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ADIPOQQ15848 244 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 LILRA2Q8N149 483 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 FAM216AQ8WUB2 273 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 WDR83Q9BRX9 315 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ELOVL3Q9HB03 270 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 Q9N2K0 584 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 MRPL33O75394 65 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 GCGP01275 180 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM267Q0VDI3 215 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 KCNJ15Q99712 375 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 LY75O60449 1722 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 TMEM238LA0A1B0GVL6 79 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 A6NJY4 79 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 SLC17A3O00476 420 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 FRS3O43559 492 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 OPN1MWP04001 364 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 OPN1MW2P0DN77 364 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 OPN1MW3P0DN78 364 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 BMP5P22003 454 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ZNF133P52736 654 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 RPEL1Q2QD12 228 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 Q499Y3 187 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ADGRE4PQ86SQ3 457 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 MMP21Q8N119 569 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 RNF175Q8N4F7 328 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ATOH8Q96SQ7 321 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 RPP25Q9BUL9 199 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 ANKRD10Q9NXR5 420 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 AMDHD2Q9Y303 409 aa12.78□□□□□ -0.36
RAPGEF1-202ENST00000372190 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 ISLRO14498 428 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 B4GALT3O60512 393 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 COX6CP09669 75 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 HIST1H1CP16403 213 aaKnown RBP12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 GPR12P47775 334 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 DAPP51397 102 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 SIGLEC14Q08ET2 396 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 PHLDA2Q53GA4 152 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 PLSCR5A0PG75 271 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 NEURL1O76050 574 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 LIPAP38571 399 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 H2BFWTQ7Z2G1 175 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 CDC20BQ86Y33 519 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 OR10P1Q8NGE3 313 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 SLAMF8Q9P0V8 285 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 POMT2Q9UKY4 750 aa12.77□□□□□ -0.36
RAPGEF1-202ENST00000372190 MYH15Q9Y2K3 1946 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 J3KTA2 159 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 CA2P00918 260 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 SLC35A1P78382 337 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 SEMA3BQ13214 749 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 TMEM241Q24JQ0 296 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 TMEM81Q6P7N7 255 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 PSMG3Q9BT73 122 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 LMF2Q9BU23 707 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 EVA1AQ9H8M9 152 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 PAM16Q9Y3D7 125 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 COX19Q49B96 90 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 NKAIN1Q4KMZ8 207 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 WBP2NLQ6ICG8 309 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 CADM4Q8NFZ8 388 aa12.77□□□□□ -0.37
RAPGEF1-202ENST00000372190 SLC26A10Q8NG04 563 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms