RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CX3CR1P49238 355 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 RAD23AP54725 363 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 CDH15P55291 814 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 MAB21L1Q13394 359 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 CHRFAM7AQ494W8 412 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 LCN1P1Q5VSP4 162 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 PRSS45Q7RTY3 260 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 BCDIN3DQ7Z5W3 292 aaKnown RBP8.32□□□□□ -1.08
CD48-202ENST00000368046 KRT77Q7Z794 578 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 SPERTQ8NA61 448 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 OR10AD1Q8NGE0 317 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 OR52H1Q8NGJ2 320 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 OR2AE1Q8NHA4 323 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 TRUB1Q8WWH5 349 aaKnown RBP8.32□□□□□ -1.08
CD48-202ENST00000368046 ERGIC1Q969X5 290 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 MEGF10Q96KG7 1140 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 IL4I1Q96RQ9 567 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 ZNF665Q9H7R5 613 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 HAO2Q9NYQ3 351 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 USE1Q9NZ43 259 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 LPAR3Q9UBY5 353 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 NOP16Q9Y3C1 178 aaKnown RBP8.32□□□□□ -1.08
CD48-202ENST00000368046 NPTNQ9Y639 398 aa8.32□□□□□ -1.08
CD48-202ENST00000368046 CCDC182A6NF36 153 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ACOD1A6NK06 481 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 FAM157AC9JC47 383 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 F5H5P2 479 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 TMEM178BH3BS89 294 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ZNF254O75437 659 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 HLA-DPB1P04440 258 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ALPLP05186 524 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 SBK2P0C263 348 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 CA6P23280 308 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ANOS1P23352 680 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 CFL1P23528 166 aaKnown RBP8.31□□□□□ -1.08
CD48-202ENST00000368046 NAA10P41227 235 aaPredicted RBP8.31□□□□□ -1.08
CD48-202ENST00000368046 GATA4P43694 442 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 DVL1P1P54792 670 aaPredicted RBP8.31□□□□□ -1.08
CD48-202ENST00000368046 ZNF121P58317 390 aaPredicted RBP8.31□□□□□ -1.08
CD48-202ENST00000368046 FAM3AP98173 230 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ROM1Q03395 351 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ZNF181Q2M3W8 571 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 LRRN1Q6UXK5 716 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 FAM57BQ71RH2 274 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 LRRC28Q86X40 367 aaPredicted RBP8.31□□□□□ -1.08
CD48-202ENST00000368046 KLBQ86Z14 1044 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 PLPP7Q8NBV4 271 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 OR8J1Q8NGP2 316 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ASB17Q8WXJ9 295 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 RAB39BQ96DA2 213 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 REEP6Q96HR9 211 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 PGAM5Q96HS1 289 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 MNTQ99583 582 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 GABARAPL3Q9BY60 117 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 MROQ9BYG7 248 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 SHARPINQ9H0F6 387 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 OR10A2Q9H208 303 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 RIBC2Q9H4K1 309 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 RGCCQ9H4X1 137 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 S100A14Q9HCY8 104 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 DNAJC27Q9NZQ0 273 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 MRPL15Q9P015 296 aaKnown RBP8.31□□□□□ -1.08
CD48-202ENST00000368046 ZNF319Q9P2F9 582 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 ORC6Q9Y5N6 252 aa8.31□□□□□ -1.08
CD48-202ENST00000368046 CR1P17927 2039 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 LRRC30A6NM36 301 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 FSTL3O95633 263 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 IGHV2-70P01814 119 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 IGHV2-5P01817 119 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 MSMBP08118 114 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 MRPL3P09001 348 aaKnown RBP8.3□□□□□ -1.08
CD48-202ENST00000368046 PCMT1P22061 227 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 CD200P41217 278 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 ALDH3A2P51648 485 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 CDC42P60953 191 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 TMED1Q13445 227 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 OR8G1Q15617 311 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 SNCBQ16143 134 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 TIGD6Q17RP2 521 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 TMEM155Q4W5P6 130 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 FAM120AOSQ5T036 256 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 GLCCI1Q86VQ1 547 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 GID4Q8IVV7 300 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 ZNF679Q8IYX0 411 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 ZNF420Q8TAQ5 688 aaPredicted RBP8.3□□□□□ -1.08
CD48-202ENST00000368046 ITFG2Q969R8 447 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 HRASLS5Q96KN8 279 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 SIGLEC11Q96RL6 698 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 CNN2Q99439 309 aaKnown RBP8.3□□□□□ -1.08
CD48-202ENST00000368046 GAL3ST1Q99999 423 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 C9orf16Q9BUW7 83 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 TMEM165Q9HC07 324 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 BRD7Q9NPI1 651 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 CLN6Q9NWW5 311 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 DCAF16Q9NXF7 216 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 WARS2Q9UGM6 360 aaKnown RBP8.3□□□□□ -1.08
CD48-202ENST00000368046 ZNF391Q9UJN7 358 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 KLHDC2Q9Y2U9 406 aa8.3□□□□□ -1.08
CD48-202ENST00000368046 FN1P02751 2386 aaKnown RBP8.3□□□□□ -1.08
CD48-202ENST00000368046 TLN2Q9Y4G6 2542 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms