RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TRAV36DV7A0A075B6V5 113 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 TEX13DA0A0J9YY54 714 aaPredicted RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 A0A1W2PQD3 144 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ARGFXA6NJG6 315 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 DCTN6O00399 190 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 GNB5O14775 395 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 SRSF10O75494 262 aaKnown RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 NSA2O95478 260 aaKnown RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 IFNA4P05014 189 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 CD79AP11912 226 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 PAX6P26367 422 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 SLC6A9P48067 706 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 CX3CR1P49238 355 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ARL4DP49703 201 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 CCL11P51671 97 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 PRKXP51817 358 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 LUMP51884 338 aaPredicted RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 EIF5AP63241 154 aaKnown RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 OC90Q02509 493 aaPredicted RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 EGR4Q05215 589 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 SCRN3Q0VDG4 424 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 PMPCAQ10713 525 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 INPP5JQ15735 1006 aaPredicted RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 FAM189A2Q15884 450 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 SGCBQ16585 318 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 HFEQ30201 348 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ACTBL2Q562R1 376 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 RNASE10Q5GAN6 216 aaKnown RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 PRAMEF17Q5VTA0 474 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 NSUN5P2Q63ZY6 315 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ASPHD2Q6ICH7 369 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 MAMDC2Q7Z304 686 aaPredicted RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 ZNF584Q8IVC4 421 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 GALNT16Q8N428 558 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 C10orf53Q8N6V4 93 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 Q8NA96 180 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 RELL2Q8NC24 303 aaPredicted RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 OR10AC1Q8NH08 325 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 OR4C3Q8NH37 302 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 C16orf52Q8NHV5 167 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ZNF519Q8TB69 540 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 DOK4Q8TEW6 326 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ASB5Q8WWX0 329 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 MR1Q95460 341 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 MOGAT1Q96PD6 335 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 TSNAXQ99598 290 aaKnown RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 PHB2Q99623 299 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ZNF471Q9BX82 626 aaPredicted RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 NMES1Q9C002 83 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 TMEM185BQ9H7F4 350 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 SRA1Q9HD15 236 aaKnown RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 BIN3Q9NQY0 253 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 MBD2Q9UBB5 411 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 ZNF346Q9UL40 294 aaKnown RBP10.24□□□□□ -0.77
USF1-201ENST00000368019 ANAPC10Q9UM13 185 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 HHLA2Q9UM44 414 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 C9orf170A2RU37 121 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 FRG2CA6NGY1 282 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 TVP23AA6NH52 213 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 NPIPB13A6NJU9 1138 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 FAM74A7A6NL05 159 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 DBX1A6NMT0 343 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 CEACAM18A8MTB9 384 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 NPIPB4C9JG80 1138 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 H0YC42 278 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 SCDO00767 359 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 XKRYO14609 159 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 AGFG2O95081 481 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 SNAPINO95295 136 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 DUS4LO95620 317 aaKnown RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 HLA-AP01891 365 aaKnown RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 CLPSP04118 112 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 KLK3P07288 261 aaPredicted RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 RNF224P0DH78 156 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 HSD11B1P28845 292 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 RFC3P40938 356 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 RPL27P61353 136 aaKnown RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 DCAF7P61962 342 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 BTG2P78543 158 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 DEFA5Q01523 94 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 MEP1BQ16820 701 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 ZNF260Q3ZCT1 412 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 NKAPLQ5M9Q1 402 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 TMEM244Q5VVB8 128 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 YOD1Q5VVQ6 348 aaPredicted RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 ELP2Q6IA86 826 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 DNM1P34Q6PK57 102 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 C17orf107Q6ZR85 190 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 INO80EQ8NBZ0 244 aaPredicted RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 TMEM185AQ8NFB2 350 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 OR1J2Q8NGS2 313 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 SSC4DQ8WTU2 575 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 C8orf44Q96CB5 159 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 PIK3IP1Q96FE7 263 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 NARS2Q96I59 477 aaKnown RBP10.23□□□□□ -0.77
USF1-201ENST00000368019 ZNF285Q96NJ3 590 aa10.23□□□□□ -0.77
USF1-201ENST00000368019 TSSK2Q96PF2 358 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms