RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 KLHL36Q8N4N3 616 aa20.15■□□□□ 0.82
PFDN2-201ENST00000368010 OR56B2PQ8NGI1 322 aa20.15■□□□□ 0.82
PFDN2-201ENST00000368010 ADAT1Q9BUB4 502 aaKnown RBP20.15■□□□□ 0.82
PFDN2-201ENST00000368010 YIPF3Q9GZM5 350 aa20.15■□□□□ 0.82
PFDN2-201ENST00000368010 OR10A2Q9H208 303 aa20.15■□□□□ 0.82
PFDN2-201ENST00000368010 PCDHB10Q9UN67 800 aa20.15■□□□□ 0.82
PFDN2-201ENST00000368010 DYSFO75923 2080 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 M0R129 80 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 PLPP2O43688 288 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 MRPL3P09001 348 aaKnown RBP20.14■□□□□ 0.81
PFDN2-201ENST00000368010 ALOX5APP20292 161 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 CFL1P23528 166 aaKnown RBP20.14■□□□□ 0.81
PFDN2-201ENST00000368010 DDOSTP39656 456 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 CD200P41217 278 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 GATA4P43694 442 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 MAB21L1Q13394 359 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 ZMYND11Q15326 602 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 ZNF181Q2M3W8 571 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 ZFP1Q6P2D0 407 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 LRRC28Q86X40 367 aaPredicted RBP20.14■□□□□ 0.81
PFDN2-201ENST00000368010 TCEANCQ8N8B7 351 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 TMEM163Q8TC26 289 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 ERGIC1Q969X5 290 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 SGK3Q96BR1 496 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 REEP6Q96HR9 211 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 PGAM5Q96HS1 289 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 OSBPL10Q9BXB5 764 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 NIPAL2Q9H841 368 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 BRD7Q9NPI1 651 aa20.14■□□□□ 0.81
PFDN2-201ENST00000368010 H2AFY2Q9P0M6 372 aaPredicted RBP20.14■□□□□ 0.81
PFDN2-201ENST00000368010 GMDSO60547 372 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 CYB5R3P00387 301 aaPredicted RBP20.13■□□□□ 0.81
PFDN2-201ENST00000368010 IRF2P14316 349 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 SRP14P37108 136 aaKnown RBP20.13■□□□□ 0.81
PFDN2-201ENST00000368010 MDH2P40926 338 aaKnown RBP20.13■□□□□ 0.81
PFDN2-201ENST00000368010 NXNL2Q5VZ03 156 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 LRRN1Q6UXK5 716 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 KRT77Q7Z794 578 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 C1orf87Q8N0U7 546 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 MUC20Q8N307 709 aaPredicted RBP20.13■□□□□ 0.81
PFDN2-201ENST00000368010 CNN2Q99439 309 aaKnown RBP20.13■□□□□ 0.81
PFDN2-201ENST00000368010 PKP2Q99959 881 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 RBM4BQ9BQ04 359 aaKnown RBP20.13■□□□□ 0.81
PFDN2-201ENST00000368010 RGCCQ9H4X1 137 aa20.13■□□□□ 0.81
PFDN2-201ENST00000368010 SLC22A31A6NKX4 558 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 ANKRD30BLA7E2S9 258 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 PSMA6P60900 246 aaKnown RBP20.12■□□□□ 0.81
PFDN2-201ENST00000368010 EFNB1P98172 346 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 FAM3AP98173 230 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 GFOD2Q3B7J2 385 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 AADACL4Q5VUY2 407 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 PRAMEF6Q5VXH4 476 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 KCTD18Q6PI47 426 aaPredicted RBP20.12■□□□□ 0.81
PFDN2-201ENST00000368010 MEPCEQ7L2J0 689 aaKnown RBP20.12■□□□□ 0.81
PFDN2-201ENST00000368010 KLBQ86Z14 1044 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 C10orf67Q8IYJ2 551 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 SPERTQ8NA61 448 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 OR11L1Q8NGX0 322 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 GABARAPL3Q9BY60 117 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 RIBC2Q9H4K1 309 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 PATZ1Q9HBE1 687 aaKnown RBP20.12■□□□□ 0.81
PFDN2-201ENST00000368010 LRP12Q9Y561 859 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 TMEM14AQ9Y6G1 99 aa20.12■□□□□ 0.81
PFDN2-201ENST00000368010 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.11■□□□□ 0.81
PFDN2-201ENST00000368010 hCG_38984A0A1B0GV85 526 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 H3BNX3 289 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 HCCSP53701 268 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 FAHD2BQ6P2I3 314 aaPredicted RBP20.11■□□□□ 0.81
PFDN2-201ENST00000368010 BCDIN3DQ7Z5W3 292 aaKnown RBP20.11■□□□□ 0.81
PFDN2-201ENST00000368010 GID4Q8IVV7 300 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 Q8TCH9 128 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 FAHD2AQ96GK7 314 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 IL4I1Q96RQ9 567 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 ZNF319Q9P2F9 582 aa20.11■□□□□ 0.81
PFDN2-201ENST00000368010 A0A0G2JMP0 313 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 A0A0X1KG70 313 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 FOXH1O75593 365 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 PNPP00491 289 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 POLR2IP36954 125 aaKnown RBP20.1■□□□□ 0.81
PFDN2-201ENST00000368010 PMELP40967 661 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 MZT1Q08AG7 82 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 DEGS2Q6QHC5 323 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 OR4M2Q8NGB6 313 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 ASB17Q8WXJ9 295 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 DVL3Q92997 716 aaPredicted RBP20.1■□□□□ 0.81
PFDN2-201ENST00000368010 MROQ9BYG7 248 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 FN3KRPQ9HA64 309 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 G6PC2Q9NQR9 355 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 UFSP2Q9NUQ7 469 aa20.1■□□□□ 0.81
PFDN2-201ENST00000368010 FAM20BO75063 409 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 ZNF205O95201 554 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 PTBP3O95758 552 aaKnown RBP20.09■□□□□ 0.81
PFDN2-201ENST00000368010 THBS2P35442 1172 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 GSK3AP49840 483 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 LCN2P80188 198 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 MPPED2Q15777 294 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 SNCBQ16143 134 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 PLPP7Q8NBV4 271 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 OR8S1Q8NH09 359 aa20.09■□□□□ 0.81
PFDN2-201ENST00000368010 RAB3IPQ96QF0 476 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms