RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 OR52N5Q8NH56 324 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 MSI2Q96DH6 328 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 A0A1B0GTQ1 180 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 SPINT1O43278 529 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 CTSVO60911 334 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 PMP2P02689 132 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 HPNP05981 417 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC2A1P11166 492 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 GLDNQ6ZMI3 551 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 LINC00518Q8N0U6 118 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 TCTEX1D1Q8N7M0 179 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 CCL4L1Q8NHW4 92 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 KLHL13Q9P2N7 655 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 TP53TG5Q9Y2B4 290 aa4.85□□□□□ -1.63
CDC42BPA-204ENST00000366767 PRAMEF25A6NGN4 478 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 KITLGP21583 273 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 GPR3P46089 330 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 CSNK1A1P48729 337 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 CRYBA2P53672 197 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 RPS18P62269 152 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PRSS53Q2L4Q9 553 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 TMEM164Q5U3C3 297 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 WDR74Q6RFH5 385 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 DEFB119Q8N690 84 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 LINC00469Q8N7U9 141 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 DTD1Q8TEA8 209 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PTP4A1Q93096 173 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ANKRD9Q96BM1 317 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC6A18Q96N87 628 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 GPA33Q99795 319 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PLA2G2FQ9BZM2 168 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 MED9Q9NWA0 146 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ACAA1P09110 424 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SPP1P10451 314 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 HAAOP46952 286 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC35A1P78382 337 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 CD300CQ08708 224 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC10A1Q14973 349 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF528Q3MIS6 628 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 FAM162BQ5T6X4 162 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR51S1Q8NGJ8 323 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZG16BQ96DA0 208 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 WWTR1Q9GZV5 400 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PLXNA3P51805 1871 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 XKRY2A2RUG3 117 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 LINC00862A6NCI5 91 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR5H14A6NHG9 310 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SCGB2A1O75556 95 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR1D4P47884 311 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 HBG1P69891 147 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 HBG2P69892 147 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 IAH1Q2TAA2 248 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR2B11Q5JQS5 317 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SYT13Q7L8C5 426 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 APOBEC4Q8WW27 367 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 MR1Q95460 341 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF107Q9UII5 783 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 FLVCR2Q9UPI3 526 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 B9D1Q9UPM9 204 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 HEATR5BQ9P2D3 2071 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 TRBV11-1A0A0K0K1C0 115 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 C7orf66A4D0T2 115 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 CYR61O00622 381 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PSG6Q00889 435 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 GSG1Q2KHT4 349 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC25A35Q3KQZ1 300 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 THEM4Q5T1C6 240 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC35D2Q76EJ3 337 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 LRRTM1Q86UE6 522 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 CADM4Q8NFZ8 388 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 OTOSQ8NHW6 89 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 HINT2Q9BX68 163 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 C6orf106Q9H6K1 298 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 MMP25Q9NPA2 562 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ALKBH4Q9NXW9 302 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 WSB2Q9NYS7 404 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 LAMP3Q9UQV4 416 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 LOC102725191A0A1B0GVB3 256 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PRAMEF27A3QJZ7 478 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 NDUFB6O95139 128 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 MYOGP15173 224 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ATF1P18846 271 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 LBX1P52954 281 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 DCDP81605 110 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PMS2P11Q13670 270 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF658BQ4V348 819 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 NLGN4YQ8NFZ3 816 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 TSSK2Q96PF2 358 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 PBX4Q9BYU1 374 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 OR10A2Q9H208 303 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 ZNF160Q9HCG1 818 aa4.84□□□□□ -1.63
CDC42BPA-204ENST00000366767 H0Y8X5 98 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 FCER1GP30273 86 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 FUT5Q11128 374 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 SHEQ5VZ18 495 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 MARCH3Q86UD3 253 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 BAP18Q8IXM2 172 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM217Q8N7C4 229 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 SLC39A7Q92504 469 aa4.84□□□□□ -1.64
CDC42BPA-204ENST00000366767 PLK3Q9H4B4 646 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms