RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TPTE2P1Q5T6R2 138 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 OPN5Q6U736 354 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR7G2Q8NG99 324 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR4A4PQ8NGN8 299 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR13C2Q8NGS9 318 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 LYPD6BQ8NI32 183 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 N4BP2L2Q92802 583 aaPredicted RBP1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 TMEM159Q96B96 161 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 ZBED3Q96IU2 234 aaPredicted RBP1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 KCNS1Q96KK3 526 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR4K3Q96R72 315 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 STACQ99469 402 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 PKMYT1Q99640 499 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 ANKRA2Q9H9E1 313 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 RRAGDQ9NQL2 400 aaPredicted RBP1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 DYRK4Q9NR20 520 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 IL37Q9NZH6 218 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 VWA8A3KMH1 1905 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 SIRPB1O00241 398 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 GABRPO00591 440 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 SLC9A3R1O14745 358 aaPredicted RBP1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 GATBO75879 557 aaKnown RBP1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 IGLV2-8P01709 118 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 HSPD1P10809 573 aaKnown RBP1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 ACTR3P61158 418 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 SSX2Q16385 188 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 C22orf42Q6IC83 251 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 FAM131AQ6UXB0 335 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR56B2PQ8NGI1 322 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR1L1Q8NH94 360 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 RXFP4Q8TDU9 374 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 DYNLL2Q96FJ2 89 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 UQCC2Q9BRT2 126 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 DCAF16Q9NXF7 216 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 SLC39A1Q9NY26 324 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 TAS2R1Q9NYW7 299 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 RWDD2AQ9UIY3 292 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 SLC17A4Q9Y2C5 497 aa1.64□□□□□ -2.15
RNU4-28P-201ENST00000364739 TAAR5O14804 337 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 PGA5P0DJD9 388 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 USF1P22415 310 aaPredicted RBP1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 GGT2P36268 569 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 TNNT2P45379 298 aaPredicted RBP1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 GZMMP51124 257 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 ZNF121P58317 390 aaPredicted RBP1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 RTL4Q6ZR62 310 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 FAM228AQ86W67 206 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 SLC2A14Q8TDB8 520 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 KLF6Q99612 283 aaPredicted RBP1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 TMEM38AQ9H6F2 299 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 PITPNC1Q9UKF7 332 aa1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 YARS2Q9Y2Z4 477 aaKnown RBP1.63□□□□□ -2.15
RNU4-28P-201ENST00000364739 HEATR9A2RTY3 570 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 SDHAF1A6NFY7 115 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 E7EQL1 145 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 M0R1X1 148 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 AP3B1O00203 1094 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 LSM1O15116 133 aaKnown RBP1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 SCELO95171 688 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 UQCRFS1P1P0C7P4 283 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 PGA4P0DJD7 388 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 PGA3P0DJD8 388 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 SLC9A3R2Q15599 337 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 CD300LGQ6UXG3 332 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 USP50Q70EL3 339 aaPredicted RBP1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 NT5DC3Q86UY8 548 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 SLC22A9Q8IVM8 553 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 DRAM1Q8N682 238 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 C19orf18Q8NEA5 215 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR5K2Q8NHB8 316 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 ELMO1Q92556 727 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 RERGQ96A58 199 aaPredicted RBP1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 KCNS3Q9BQ31 491 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 RGS18Q9NS28 235 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 ASF1BQ9NVP2 202 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 MTCH1Q9NZJ7 389 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 COL5A3P25940 1745 aaPredicted RBP1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 ATAD2BQ9ULI0 1458 aa1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 COL22A1Q8NFW1 1626 aaPredicted RBP1.62□□□□□ -2.15
RNU4-28P-201ENST00000364739 IGHV3OR16-9A0A0B4J2B5 98 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 SMCO3A2RU48 225 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 NME4O00746 187 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 NDUFAB1O14561 156 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 FSTL3O95633 263 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 FGFR1OPO95684 399 aaKnown RBP1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 LSM8O95777 96 aaKnown RBP1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 CTRB1P17538 263 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 RRM2P31350 389 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 BTN1A1Q13410 526 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 ZNF829Q3KNS6 432 aaPredicted RBP1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 XKR7Q5GH72 579 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 NANOGNBQ7Z5D8 188 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 AKR7LQ8NHP1 331 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 NT5C3AQ9H0P0 336 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 DSN1Q9H410 356 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 TRIM45Q9H8W5 580 aaPredicted RBP1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 ACP6Q9NPH0 428 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 PARP11Q9NR21 331 aa1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 RBFOX1Q9NWB1 397 aaKnown RBP1.61□□□□□ -2.15
RNU4-28P-201ENST00000364739 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms