RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 PIGQQ9BRB3 760 aa19.96■□□□□ 0.79
LDB1-201ENST00000361198 ZPBPQ9BS86 351 aa19.96■□□□□ 0.79
LDB1-201ENST00000361198 NCKAP5O14513 1909 aa19.96■□□□□ 0.79
LDB1-201ENST00000361198 FXYD6-FXYD2A0A087WZ82 144 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 A0A1B0GTI1 187 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 HPP00738 406 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 P04436 131 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 JMJD7P0C870 316 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 CSNK1A1P48729 337 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 SLC39A7Q92504 469 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 FXYD6Q9H0Q3 95 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 POFUT1Q9H488 388 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 KIAA1549Q9HCM3 1950 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 VAMP5O95183 116 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 WDPCPO95876 746 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 CD74P04233 296 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 FCER2P06734 321 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 OR4E1P0C645 316 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 ZNF735P0CB33 412 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 RPA2P15927 270 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 BDKRB2P30411 391 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 CSNK2A1P68400 391 aaPredicted RBP19.95■□□□□ 0.78
LDB1-201ENST00000361198 SMUG1Q53HV7 270 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 OR52N4Q8NGI2 321 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 SOX7Q9BT81 388 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 EDEM2Q9BV94 578 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 ZNF416Q9BWM5 594 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 SPRY4Q9C004 299 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 P4HTMQ9NXG6 502 aa19.95■□□□□ 0.78
LDB1-201ENST00000361198 TMEM82A0PJX8 343 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 C9orf172C9J069 976 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 NPIPA2E9PIF3 369 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 NPIPA3F8WFD2 350 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 ZP3P21754 424 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 ZNF121P58317 390 aaPredicted RBP19.94■□□□□ 0.78
LDB1-201ENST00000361198 SGCAQ16586 387 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 ACER2Q5QJU3 275 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 ALKAL2Q6UX46 152 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 GSG1LQ6UXU4 331 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 ZNF627Q7L945 461 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 YRDCQ86U90 279 aaKnown RBP19.94■□□□□ 0.78
LDB1-201ENST00000361198 ESX1Q8N693 406 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 OR9K2Q8NGE7 335 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 NAA11Q9BSU3 229 aaPredicted RBP19.94■□□□□ 0.78
LDB1-201ENST00000361198 SRXN1Q9BYN0 137 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 CNTD2Q9H8S5 307 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 ZNF319Q9P2F9 582 aa19.94■□□□□ 0.78
LDB1-201ENST00000361198 HOXD11P31277 338 aaPredicted RBP19.93■□□□□ 0.78
LDB1-201ENST00000361198 B3GALT5-AS1P59052 145 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 H3F3CQ6NXT2 135 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 GALNT16Q8N428 558 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 OR1M1Q8NGA1 313 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 OR8B12Q8NGG6 310 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 FOXRED1Q96CU9 486 aaPredicted RBP19.93■□□□□ 0.78
LDB1-201ENST00000361198 MOB1AQ9H8S9 216 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 A0A1W2PNU3 283 aaPredicted RBP19.93■□□□□ 0.78
LDB1-201ENST00000361198 RFPL4AA6NLU0 287 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 RFPL4AL1F8VTS6 287 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 CD59P13987 128 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 PMPCAQ10713 525 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 HYAL4Q2M3T9 481 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 LY6G6FQ5SQ64 297 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 OR6K3Q8NGY3 331 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 TMEM54Q969K7 222 aa19.93■□□□□ 0.78
LDB1-201ENST00000361198 TINAGL1Q9GZM7 467 aaPredicted RBP19.93■□□□□ 0.78
LDB1-201ENST00000361198 CYB5AP00167 134 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 RFPL3SP0C7P2 107 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 NR2C1P13056 603 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 SRD5A2P31213 254 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 MOGAT2Q3SYC2 334 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 PLA2G2CQ5R387 149 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 C11orf88Q6PI97 169 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 ABHD12BQ7Z5M8 362 aaPredicted RBP19.92■□□□□ 0.78
LDB1-201ENST00000361198 TMEM123Q8N131 208 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 C12orf45Q8N5I9 185 aaPredicted RBP19.92■□□□□ 0.78
LDB1-201ENST00000361198 OR13C9Q8NGT0 318 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 CXorf58Q96LI9 332 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 DDA1Q9BW61 102 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 FOXJ2Q9P0K8 574 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 CDX4O14627 284 aaPredicted RBP19.92■□□□□ 0.78
LDB1-201ENST00000361198 RAB6AP20340 208 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 CX3CR1P49238 355 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 CAPZA1P52907 286 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 GK2Q14410 553 aaPredicted RBP19.92■□□□□ 0.78
LDB1-201ENST00000361198 CLVS2Q5SYC1 327 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 C10orf128Q5T292 105 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 ZIC4Q8N9L1 334 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 SPERTQ8NA61 448 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 GALNT11Q8NCW6 608 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 OR5D14Q8NGL3 314 aa19.92■□□□□ 0.78
LDB1-201ENST00000361198 ZNF736B4DX44 427 aaPredicted RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 M0QYG6 137 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 AMY2AP04746 511 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 SERPINA7P05543 415 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 ABOP16442 354 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 LSM6P62312 80 aaKnown RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 ZNF660Q6AZW8 331 aaPredicted RBP19.91■□□□□ 0.78
LDB1-201ENST00000361198 COMMD2Q86X83 199 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 BEST3Q8N1M1 668 aa19.91■□□□□ 0.78
LDB1-201ENST00000361198 OR14L1PQ8NHC6 308 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms