RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ENPP2Q13822 863 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 HNRNPA1L2Q32P51 320 aaKnown RBP13.31□□□□□ -0.28
UBAP1-202ENST00000359544 LBHQ53QV2 105 aaPredicted RBP13.31□□□□□ -0.28
UBAP1-202ENST00000359544 SLC18B1Q6NT16 456 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 CLEC18BQ6UXF7 455 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 GKN2Q86XP6 184 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 POC1AQ8NBT0 407 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 BHLHE23Q8NDY6 225 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 OR51F2Q8NH61 342 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 MAFIPQ8WZ33 124 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 RAB7BQ96AH8 199 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 CTHRC1Q96CG8 243 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 RHOVQ96L33 236 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 LMF2Q9BU23 707 aaKnown RBP13.31□□□□□ -0.28
UBAP1-202ENST00000359544 EIF5A2Q9GZV4 153 aaKnown RBP13.31□□□□□ -0.28
UBAP1-202ENST00000359544 SEC14L6B5MCN3 397 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 LATO43561 262 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 OR10H2O60403 315 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 OR2C1O95371 312 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 GPANK1O95872 356 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 IGKV1D-16P01601 117 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 PMP2P02689 132 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 PNMTP11086 282 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 TNFRSF4P43489 277 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 UCP2P55851 309 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 RAP1AP62834 184 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 SLC9A3R2Q15599 337 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 TOMM34Q15785 309 aaPredicted RBP13.3□□□□□ -0.28
UBAP1-202ENST00000359544 MIDNQ504T8 468 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 ACTBL2Q562R1 376 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 ZNF615Q8N8J6 731 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 OR13C3Q8NGS6 347 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 OR4K15Q8NH41 348 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 RLN3Q8WXF3 142 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 TM4SF19Q96DZ7 209 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 TSPAN32Q96QS1 320 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 GPR132Q9UNW8 380 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 IFITM10A6NMD0 228 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 PNPP00491 289 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 TDGF1P13385 188 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 RPS10P46783 165 aaKnown RBP13.3□□□□□ -0.28
UBAP1-202ENST00000359544 PKIAP61925 76 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 PSG6Q00889 435 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 SPOCK1Q08629 439 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 SLC22A6Q4U2R8 563 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 KCTD18Q6PI47 426 aaPredicted RBP13.3□□□□□ -0.28
UBAP1-202ENST00000359544 CATSPERDQ86XM0 798 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 ZNF440Q8IYI8 595 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 FAM160A2Q8N612 972 aaPredicted RBP13.3□□□□□ -0.28
UBAP1-202ENST00000359544 OR51A2Q8NGJ7 313 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 MARS2Q96GW9 593 aaKnown RBP13.3□□□□□ -0.28
UBAP1-202ENST00000359544 PBDC1Q9BVG4 233 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 KCNJ16Q9NPI9 418 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 HHLA2Q9UM44 414 aa13.3□□□□□ -0.28
UBAP1-202ENST00000359544 TCRBV21S2A2A0A5A6 115 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 TSTD3H0UI37 97 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 TERTO14746 1132 aaKnown RBP13.29□□□□□ -0.28
UBAP1-202ENST00000359544 HLA-DQA2P01906 255 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 HOXB2P14652 356 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 P2RY2P41231 377 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 NDUFA6P56556 154 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 RAB4BP61018 213 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 ROM1Q03395 351 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 AKR7LQ8NHP1 331 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 SSX3Q99909 188 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 NUDT16L1Q9BRJ7 211 aaKnown RBP13.29□□□□□ -0.28
UBAP1-202ENST00000359544 KIR3DX1Q9H7L2 352 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 MMP25Q9NPA2 562 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 MMP17Q9ULZ9 603 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 TMED3Q9Y3Q3 217 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 A0A1W2PQF6 199 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 WIPF3A6NGB9 483 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 IGLON5A6NGN9 336 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 ZNF860A6NHJ4 632 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 CEACAM18A8MTB9 384 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 BCAT2O15382 392 aaPredicted RBP13.29□□□□□ -0.28
UBAP1-202ENST00000359544 SNRNP200O75643 2136 aaKnown RBP13.29□□□□□ -0.28
UBAP1-202ENST00000359544 ASAH2BP0C7U1 165 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 SPCS3P61009 180 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 RPL18Q07020 188 aaKnown RBP13.29□□□□□ -0.28
UBAP1-202ENST00000359544 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 CD300LFQ8TDQ1 290 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 TMEM230Q96A57 120 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 MEGF10Q96KG7 1140 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 OR10C1Q96KK4 312 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 YPEL4Q96NS1 127 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 MOGAT1Q96PD6 335 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 G6PC3Q9BUM1 346 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 SLC35B3Q9H1N7 401 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 C5orf66Q9H5L9 145 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 BCO1Q9HAY6 547 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 TMEM74BQ9NUR3 256 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 PLA2G2EQ9NZK7 142 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 LUZP4Q9P127 313 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 HDGFL3Q9Y3E1 203 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 HEBP2Q9Y5Z4 205 aa13.29□□□□□ -0.28
UBAP1-202ENST00000359544 SERINC4A6NH21 518 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 K7EPK0 472 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 F10P00742 488 aa13.28□□□□□ -0.28
UBAP1-202ENST00000359544 S1PR1P21453 382 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms