RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 OPRM1P35372 400 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TNFRSF17Q02223 184 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 Q6ZN92 141 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 LRRC56Q8IYG6 542 aaPredicted RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 ZNF561Q8N587 486 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 GPR78Q96P69 363 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 POPDC3Q9HBV1 291 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 HCFC2Q9Y5Z7 792 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 URB1O60287 2271 aaKnown RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 GABRPO00591 440 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 CXCL13O43927 109 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 CTSCP53634 463 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 HERVK_113P61574 105 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 UNQ9370/PRO34162Q6UXP9 181 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 COMMD1Q8N668 190 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 ZCCHC14Q8WYQ9 949 aaKnown RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 ADAT1Q9BUB4 502 aaKnown RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 PARD6AQ9NPB6 346 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 MARCH5Q9NX47 278 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TAS2R4Q9NYW5 299 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 C4BP0C0L5 1744 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 OR2T8A6NH00 312 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TMPRSS11DO60235 418 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 GPR75O95800 540 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 ARG1P05089 322 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 GABRB3P28472 473 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 EIF1P41567 113 aaKnown RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 SIX1Q15475 284 aaPredicted RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 LHFPL2Q6ZUX7 228 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 UMODL1-AS1Q8N2C9 162 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 PFN4Q8NHR9 129 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 DTD2Q96FN9 168 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 MS4A4AQ96JQ5 239 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TCEAL7Q9BRU2 100 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 SLC26A1Q9H2B4 701 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 AMMECR1Q9Y4X0 333 aaPredicted RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 FBP1P09467 338 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 B4GALT1P15291 398 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 ST6GAL1P15907 406 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 PRRX1P54821 245 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 ZNF85Q03923 595 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 PRSS36Q5K4E3 855 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 SLC7A10Q9NS82 523 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TIMM10BQ9Y5J6 103 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TUBAL3A6NHL2 446 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 H2AFB1P0C5Y9 115 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 PCBP4P57723 403 aaKnown RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 DNAJB13P59910 316 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 SELENOWP63302 87 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 CCL7P80098 99 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ZNF77Q15935 545 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ETFDHQ16134 617 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 LGALSLQ3ZCW2 172 aaPredicted RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 PIANPQ8IYJ0 282 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 DCTN5Q9BTE1 182 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 LHPPQ9H008 270 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ARHGAP33O14559 1287 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 DXOO77932 396 aaKnown RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 NRASP01111 189 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ZNF528Q3MIS6 628 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 GALMQ96C23 342 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 DUS3LQ96G46 650 aaKnown RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 FETUBQ9UGM5 382 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 DNAJC25-GNG10A0A024R161 153 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 IGHV3OR16-10A0A075B7F0 116 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 M0R2Z0 102 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ANKRD34CP0C6C1 535 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 CLDN8P56748 225 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 HERPUD1Q15011 391 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 PTX4Q96A99 478 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 CHRDL1Q9BU40 450 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 IGSF5Q9NSI5 407 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ARID1BQ8NFD5 2236 aaPredicted RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 PPP1R2P9O14990 202 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 TNFAIP6P98066 277 aaPredicted RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 MICBQ29980 383 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ZNF787Q6DD87 383 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ETV3LQ6ZN32 361 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 DPPA4Q7L190 304 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 FAM131CQ96AQ9 280 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 UBE2ZQ9H832 354 aaPredicted RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 ATP1B1P05026 303 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 FDXRP22570 491 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 CA5AP35218 305 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 PPP1CAP62136 330 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 RING1Q06587 406 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 OR1C1Q15619 314 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 SSX1Q16384 188 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 PARM1Q6UWI2 310 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 SLC36A1Q7Z2H8 476 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 TMEM163Q8TC26 289 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 FLVCR1Q9Y5Y0 555 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ADAM10O14672 748 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 GEMIN2O14893 280 aaKnown RBP8.86□□□□□ -0.99
CHD3-202ENST00000358181 DEDDO75618 318 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 KCNMB1Q16558 191 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 PGGHGQ32M88 737 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 DEFB121Q5J5C9 76 aa8.86□□□□□ -0.99
CHD3-202ENST00000358181 ABHD3Q8WU67 409 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms