RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ISL1P61371 349 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 HAGHQ16775 308 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 RSPO2Q6UXX9 243 aaPredicted RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 STAC2Q6ZMT1 411 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 DGAT2L6Q6ZPD8 337 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 RHOUQ7L0Q8 258 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 FUNDC1Q8IVP5 155 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 OR4F17Q8NGA8 305 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 SPACA9Q96E40 222 aaPredicted RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 PLA2G12AQ9BZM1 189 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 NTN4Q9HB63 628 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 FGF20Q9NP95 211 aaPredicted RBP5.85□□□□□ -1.47
UPF2-201ENST00000356352 ST3GAL6Q9Y274 331 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 CHST2Q9Y4C5 530 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TCRBV5S1A1TA0A578 114 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 HRASP01112 189 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 ANKRD34CP0C6C1 535 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 BSGP35613 385 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 EMP3P54852 163 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 PIGPP57054 158 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 PJVKQ0ZLH3 352 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 FUT7Q11130 342 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 LCN15Q6UWW0 184 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 NPEPL1Q8NDH3 523 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 DEFB108BQ8NET1 73 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 OR4S1Q8NGB4 309 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 OR5AP2Q8NGF4 316 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 C1QTNF6Q9BXI9 259 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 TEX101Q9BY14 249 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 PDFQ9HBH1 243 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 URGCP-MRPS24S4R325 110 aa5.85□□□□□ -1.47
UPF2-201ENST00000356352 A0A096LPE4 126 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 A0A1W2PPZ6 126 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 AQP7P3A6NL99 342 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 K7ESM1 405 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 DCTN6O00399 190 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 IGLV3-27P01718 113 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 FGF2P09038 288 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ACSM4P0C7M7 580 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 IAPPP10997 89 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ZBTB25P24278 435 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 S100A4P26447 101 aaKnown RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 TMEM240Q5SV17 173 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 LYRM7Q5U5X0 104 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 Q6ZNX1 250 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 WFDC5Q8TCV5 224 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ROBO4Q8WZ75 1007 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 GPR78Q96P69 363 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ATP5SQ99766 215 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 MFRPQ9BY79 579 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 FBXO8Q9NRD0 319 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 SLCO1C1Q9NYB5 712 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ANKRD36CQ5JPF3 1778 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 A0A0B4J203 849 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 OR2M5A3KFT3 312 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 CLEC18AA5D8T8 446 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ST6GAL1P15907 406 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 HRH1P35367 487 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 RPL34P49207 117 aaKnown RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 GP2P55259 537 aaKnown RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 CLDN20P56880 219 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 GSG1Q2KHT4 349 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 SPRED3Q2MJR0 410 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 VWA2Q5GFL6 755 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 NHLRC1Q6VVB1 395 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 FA2HQ7L5A8 372 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 CLEC18CQ8NCF0 446 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 OR1J1Q8NGS3 322 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 MZB1Q8WU39 189 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 BCL2L2Q92843 193 aaPredicted RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 SLC35B4Q969S0 331 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 NTNG2Q96CW9 530 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 SIGLEC11Q96RL6 698 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 FAM103A1Q9BTL3 118 aaKnown RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 C20orf24Q9BUV8 137 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 TMEM147Q9BVK8 224 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 TUBB1Q9H4B7 451 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 TO15178 435 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 BCL2L11O43521 198 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 TOX4O94842 621 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 CD37P11049 281 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 CBR1P16152 277 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 NTF3P20783 257 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 SLC19A1P41440 591 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ZNF121P58317 390 aaPredicted RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 UBE2MP61081 183 aaKnown RBP5.84□□□□□ -1.47
UPF2-201ENST00000356352 DGCR2P98153 550 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 TMEM97Q5BJF2 176 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 OR2B11Q5JQS5 317 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 CYHR1Q6ZMK1 362 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 MOB3BQ86TA1 216 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 TMEM123Q8N131 208 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 ARRDC1Q8N5I2 433 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 DEFB123Q8N688 67 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 OR1F12Q8NHA8 337 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 HGDQ93099 445 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 CLDN23Q96B33 292 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 CABLES2Q9BTV7 478 aa5.84□□□□□ -1.47
UPF2-201ENST00000356352 PRR14Q9BWN1 585 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms