RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TMEM131LA2VDJ0 1609 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 G3V2L1 256 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF354AO60765 605 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-201ENST00000356083 HPP00738 406 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 ARNTP27540 789 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 FCGR2CP31995 323 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 CLDN15P56746 228 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 OR6S1Q8NH40 331 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 PKMYT1Q99640 499 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 CABLES2Q9BTV7 478 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF142P52746 1687 aaPredicted RBP15.69■□□□□ 0.1
COL27A1-201ENST00000356083 PDCD1Q15116 288 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 RNASEKQ6P5S7 137 aaKnown RBP15.69■□□□□ 0.1
COL27A1-201ENST00000356083 NUP37Q8NFH4 326 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 RXFP4Q8TDU9 374 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 PDXPQ96GD0 296 aa15.69■□□□□ 0.1
COL27A1-201ENST00000356083 IDSB3KWA1 339 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 FBP1P09467 338 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 ORM2P19652 201 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 OR3A4PP47883 348 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 SLC36A1Q7Z2H8 476 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 C5orf46Q6UWT4 87 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 LRRC15Q8TF66 581 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 UBTD2Q8WUN7 234 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 EAF1Q96JC9 268 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-201ENST00000356083 NIT2Q9NQR4 276 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 FAM181BA6NEQ2 426 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 PSMB1P20618 241 aaKnown RBP15.68■□□□□ 0.1
COL27A1-201ENST00000356083 PIGPP57054 158 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 SCD5Q86SK9 330 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 LYG1Q8N1E2 194 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 RNF2Q99496 336 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 ABHD14AQ9BUJ0 271 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 TIMM10BQ9Y5J6 103 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 CORINQ9Y5Q5 1042 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 TGOLN2O43493 480 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 HOXC8P31273 242 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 PDCD11Q14690 1871 aaKnown RBP15.68■□□□□ 0.1
COL27A1-201ENST00000356083 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-201ENST00000356083 CDX4O14627 284 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-201ENST00000356083 SULT1A2P50226 295 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 SOWAHCQ53LP3 525 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-201ENST00000356083 OR1B1Q8NGR6 318 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 PRSS3P2Q8NHM4 247 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 IL22RA2Q969J5 263 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 PHIPQ8WWQ0 1821 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 B4GALT1P15291 398 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 Q499Y3 187 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 LRRC56Q8IYG6 542 aaPredicted RBP15.68■□□□□ 0.1
COL27A1-201ENST00000356083 TDHQ8IZJ6 230 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 DEFB124Q8NES8 71 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 MARC2Q969Z3 335 aa15.68■□□□□ 0.1
COL27A1-201ENST00000356083 APOBEC1P41238 236 aaKnown RBP15.67■□□□□ 0.1
COL27A1-201ENST00000356083 GRINAQ7Z429 371 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 RETREG3Q86VR2 466 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 DUS3LQ96G46 650 aaKnown RBP15.67■□□□□ 0.1
COL27A1-201ENST00000356083 TAAR6Q96RI8 345 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 CLMPQ9H6B4 373 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 TMEM140Q9NV12 185 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 IGKV3D-11A0A0A0MRZ8 115 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 IGKV3-11P04433 115 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 CDAP32320 146 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 SHHQ15465 462 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 ADAM29Q9UKF5 820 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 FAM208AQ9UK61 1670 aaKnown RBP15.67■□□□□ 0.1
COL27A1-201ENST00000356083 A0A1W2PPQ1 181 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 LGALS7P47929 136 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 REEP5Q00765 189 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 TMEM267Q0VDI3 215 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-201ENST00000356083 SMIM21Q3B7S5 101 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF787Q6DD87 383 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 ETFRF1Q6IPR1 90 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 CYHR1Q6ZMK1 362 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 GPR150Q8NGU9 434 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 SNX11Q9Y5W9 270 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 A0A1B0GTQ1 180 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 CSO75390 466 aaKnown RBP15.67■□□□□ 0.1
COL27A1-201ENST00000356083 NAAAQ02083 359 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 GDF7Q7Z4P5 450 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 FADS6Q8N9I5 356 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 VN1R2Q8NFZ6 395 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 SMIM7Q9BQ49 75 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF696Q9H7X3 374 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 TRAV34A0A0B4J273 112 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 B4GALT3O60512 393 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 LRP3O75074 770 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 ZNF205O95201 554 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 PCBP4P57723 403 aaKnown RBP15.67■□□□□ 0.1
COL27A1-201ENST00000356083 COMMD1Q8N668 190 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 USP22Q9UPT9 525 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 B3GALT5Q9Y2C3 310 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 C10orf71Q711Q0 1435 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 CXCL13O43927 109 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 PPP2CBP62714 309 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 SLC25A26Q70HW3 274 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 OR5H6Q8NGV6 325 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 OPALINQ96PE5 141 aa15.67■□□□□ 0.1
COL27A1-201ENST00000356083 MN1Q10571 1320 aaPredicted RBP15.66■□□□□ 0.1
COL27A1-201ENST00000356083 OR5R1Q8NH85 324 aa15.66■□□□□ 0.1
COL27A1-201ENST00000356083 C6orf106Q9H6K1 298 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms