RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 LRCH1Q9Y2L9 728 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 RAI1Q7Z5J4 1906 aaPredicted RBP13.3□□□□□ -0.28
TRIM13-201ENST00000356017 ASH1LQ9NR48 2969 aaKnown RBP13.3□□□□□ -0.28
TRIM13-201ENST00000356017 C5orf63A6NC05 138 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 GGT3PA6NGU5 568 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 IQCF6A8MYZ5 107 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 OVOL3O00110 214 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 MTRF1O75570 445 aaKnown RBP13.3□□□□□ -0.28
TRIM13-201ENST00000356017 TTRP02766 147 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 ERCC1P07992 297 aaPredicted RBP13.3□□□□□ -0.28
TRIM13-201ENST00000356017 RPSAP08865 295 aaKnown RBP13.3□□□□□ -0.28
TRIM13-201ENST00000356017 PSMB10P40306 273 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 TGM4P49221 684 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 OR2G6Q5TZ20 316 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 OR2T2Q6IF00 324 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 COMMD2Q86X83 199 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 FTMTQ8N4E7 242 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 NANOGP1Q8N7R0 232 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 OR2G2Q8NGZ5 317 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 MND1Q9BWT6 205 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 CCDC90BQ9GZT6 254 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 TRIM36Q9NQ86 728 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 PLEKHA6Q9Y2H5 1048 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 ROS1P08922 2347 aa13.3□□□□□ -0.28
TRIM13-201ENST00000356017 H7C417 338 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 UBCP0CG48 685 aaKnown RBP13.29□□□□□ -0.28
TRIM13-201ENST00000356017 ATP6V1B1P15313 513 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 ANOS1P23352 680 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 WNT4P56705 351 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 FAM3AP98173 230 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 WDR38Q5JTN6 314 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 OR8G5Q8NG78 346 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 OR51E1Q8TCB6 317 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 GATAD2BQ8WXI9 593 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 TRMT61AQ96FX7 289 aaKnown RBP13.29□□□□□ -0.28
TRIM13-201ENST00000356017 CACNG6Q9BXT2 260 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 FRRS1LQ9P0K9 344 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 SLC22A13Q9Y226 551 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 FBN2P35556 2912 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 UNC79Q9P2D8 2635 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 PLCE1Q9P212 2302 aa13.29□□□□□ -0.28
TRIM13-201ENST00000356017 hCG_38984A0A1B0GV85 526 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 LOC390937A0A1W2PQ73 354 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 CD300LBA8K4G0 201 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 IGLV3-1P01715 115 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ALDH3B1P43353 468 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 GSK3AP49840 483 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 MMP15P51511 669 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 TAS2R43P59537 309 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ALKBH1Q13686 389 aaKnown RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 RPL22L1Q6P5R6 122 aaKnown RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 KLBQ86Z14 1044 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 PRSS35Q8N3Z0 413 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ZNF485Q8NCK3 441 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 CCDC54Q8NEL0 328 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 CSNK2A3Q8NEV1 391 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 SGCDQ92629 289 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 PPP1R14AQ96A00 147 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 RNF166Q96A37 237 aaPredicted RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 MBD6Q96DN6 1003 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 DIRC2Q96SL1 478 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 RAB1BQ9H0U4 201 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 GPR84Q9NQS5 396 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ZDHHC8Q9ULC8 765 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 HRNRQ86YZ3 2850 aaPredicted RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 TMEM212A6NML5 194 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 C17orf100A8MU93 164 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ISG15P05161 165 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 PAX1P15863 534 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ZNF12P17014 697 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 MAP2K3P46734 347 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ZNF81P51508 661 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 NANOS3P60323 173 aaKnown RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 IRF3Q14653 427 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 OR8B8Q15620 311 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 TMEM244Q5VVB8 128 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 DOK3Q7L591 496 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 CDH24Q86UP0 819 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 OR5AS1Q8N127 324 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 BHLHE23Q8NDY6 225 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 OR13G1Q8NGZ3 307 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 LYZL4Q96KX0 146 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 VRK1Q99986 396 aaPredicted RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 COMMD4Q9H0A8 199 aa13.28□□□□□ -0.28
TRIM13-201ENST00000356017 ZNF701Q9NV72 531 aaPredicted RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 MRPL15Q9P015 296 aaKnown RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 NOP16Q9Y3C1 178 aaKnown RBP13.28□□□□□ -0.28
TRIM13-201ENST00000356017 TRBV2A0A0J9YWF9 115 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 A0A1B0GVI7 797 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 DHRS7CA6NNS2 312 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 E9PI62 339 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 DHRS3O75911 302 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 MT-ND2P03891 347 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 NAT2P11245 290 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 CDKN1AP38936 164 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 CHN2P52757 468 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 BDH1Q02338 343 aa13.27□□□□□ -0.29
TRIM13-201ENST00000356017 DEFB113Q30KQ7 82 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms