RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 FABP5Q01469 135 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 LRRC10Q5BKY1 277 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 AVPI1Q5T686 147 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 GPX8Q8TED1 209 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 SERGEFQ9UGK8 458 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 ARRDC5A6NEK1 342 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 LRP3O75074 770 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 LALBAP00709 142 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 SOX18P35713 384 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 AQP6Q13520 282 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 IL11RAQ14626 422 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 OR2G2Q8NGZ5 317 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 C19orf43Q9BQ61 176 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 ISG20L2Q9H9L3 353 aaKnown RBP16.25■□□□□ 0.19
COL18A1-202ENST00000355480 AQP7P3A6NL99 342 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 MFSD4AQ8N468 514 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 OR10AD1Q8NGE0 317 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 ST8SIA4Q92187 359 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 GALMQ96C23 342 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 KTI12Q96EK9 354 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-202ENST00000355480 WBP1LQ9NX94 342 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 FBXL4Q9UKA2 621 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 ANKRD36CQ5JPF3 1778 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 SH2D7A6NKC9 451 aaPredicted RBP16.25■□□□□ 0.19
COL18A1-202ENST00000355480 JTBO76095 146 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 OR2Z1Q8NG97 314 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 OR5B3Q8NH48 314 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
COL18A1-202ENST00000355480 HNF1AP20823 631 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 SNRPNP63162 240 aaKnown RBP16.24■□□□□ 0.19
COL18A1-202ENST00000355480 TPBGQ13641 420 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 FAM122BQ7Z309 247 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 MOB3BQ86TA1 216 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 FAM58AQ8N1B3 248 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 RBPMSQ93062 196 aaKnown RBP16.24■□□□□ 0.19
COL18A1-202ENST00000355480 SERTM2A0A1B0GWG4 89 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 TCRBV5S2A0A599 114 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 ACOT6Q3I5F7 207 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-202ENST00000355480 VN1R1Q9GZP7 353 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 NARFLQ9H6Q4 476 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 A4GNTQ9UNA3 340 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 CHEK1O14757 476 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 PPM1DO15297 605 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 MEOX1P50221 254 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 OR4F5Q8NH21 305 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 CIB3Q96Q77 187 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-202ENST00000355480 OR4F4Q96R69 305 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 ACTR3CQ9C0K3 210 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-202ENST00000355480 MAST2Q6P0Q8 1798 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 CD3DP04234 171 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 HAGHQ16775 308 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 CXorf67Q86X51 503 aaPredicted RBP16.24■□□□□ 0.19
COL18A1-202ENST00000355480 C17orf78Q8N4C9 275 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 OR1L3Q8NH93 324 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 OR1F12Q8NHA8 337 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 CD1EP15812 388 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 DRAM2Q6UX65 266 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 TMEM123Q8N131 208 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 MARCH1Q8TCQ1 289 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 PSENENQ9NZ42 101 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 ONECUT1Q9UBC0 465 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 KCNE3Q9Y6H6 103 aa16.24■□□□□ 0.19
COL18A1-202ENST00000355480 SEC14L6B5MCN3 397 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 TSPAN12O95859 305 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ATF1P18846 271 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 PIGPP57054 158 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 UBE2MP61081 183 aaKnown RBP16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ORAI1Q96D31 301 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 V9GYS6 101 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ZFP62Q8NB50 900 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-202ENST00000355480 NCBP2LA6PVI3 153 aaKnown RBP16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF816Q0VGE8 651 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ASAH1Q13510 395 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 GNRHR2Q96P88 292 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF251Q9BRH9 671 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 YBX2Q9Y2T7 364 aaKnown RBP16.23■□□□□ 0.19
COL18A1-202ENST00000355480 PKD1L3Q7Z443 1732 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 OR2F2O95006 317 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 POU2F2P09086 479 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF83P51522 516 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 DHODHQ02127 395 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 OR2F1Q13607 317 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 C1orf210Q8IVY1 113 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 ADAT1Q9BUB4 502 aaKnown RBP16.23■□□□□ 0.19
COL18A1-202ENST00000355480 CXorf51AA0A1B0GTR3 108 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 PSMB6P28072 239 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 PRDX4Q13162 271 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 LAMP3Q9UQV4 416 aa16.23■□□□□ 0.19
COL18A1-202ENST00000355480 IGHV5-51A0A0C4DH38 117 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 A0A1B0GTL3 188 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 SLC31A2O15432 143 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 PRDM7Q9NQW5 492 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 THBS4P35443 961 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 DDOSTP39656 456 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 PLAC9Q5JTB6 97 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 TMEM179BQ7Z7N9 219 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 MAGT1Q9H0U3 335 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 ZNF391Q9UJN7 358 aa16.22■□□□□ 0.19
COL18A1-202ENST00000355480 KPTNQ9Y664 436 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms