RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 IFT27Q9BW83 186 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 MAGIXQ9H6Y5 334 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 MARCH7Q9H992 704 aa13.16□□□□□ -0.3
PDGFA-201ENST00000354513 CD300LBA8K4G0 201 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 M0R135 149 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 FABP3P05413 133 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 ACTR3P61158 418 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDGFA-201ENST00000354513 ECH1Q13011 328 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 SLC36A3Q495N2 470 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 GLYATL3Q5SZD4 288 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 ZNF362Q5T0B9 420 aaPredicted RBP13.15□□□□□ -0.3
PDGFA-201ENST00000354513 SLC35F1Q5T1Q4 408 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 Q6YL49 198 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 PGAP1Q75T13 922 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 NLRC3Q7RTR2 1065 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 ZDHHC21Q8IVQ6 265 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 OR8D4Q8NGM9 314 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 CANT1Q8WVQ1 401 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 ERGIC1Q969X5 290 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 ADAT1Q9BUB4 502 aaKnown RBP13.15□□□□□ -0.3
PDGFA-201ENST00000354513 CHIAQ9BZP6 476 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 EGLN3Q9H6Z9 239 aa13.15□□□□□ -0.3
PDGFA-201ENST00000354513 KRCC1Q9NPI7 259 aaPredicted RBP13.15□□□□□ -0.3
PDGFA-201ENST00000354513 FAM181BA6NEQ2 426 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 TVP23AA6NH52 213 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 BHLHE40O14503 412 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
PDGFA-201ENST00000354513 MELTFP08582 738 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 RAP2AP10114 183 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 RRM2P31350 389 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 KRTAP10-3P60369 221 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 OR8G1Q15617 311 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 SFRP4Q6FHJ7 346 aaPredicted RBP13.14□□□□□ -0.31
PDGFA-201ENST00000354513 FGFRL1Q8N441 504 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 SIRPDQ9H106 197 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 IL1RAPQ9NPH3 570 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 C1RLQ9NZP8 487 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 RNF7Q9UBF6 113 aa13.14□□□□□ -0.31
PDGFA-201ENST00000354513 CENPVL3A0A0U1RRI6 287 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 LGALS8O00214 317 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 OR10H3O60404 316 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 IRF2P14316 349 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 TPTEP56180 551 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 ELF3P78545 371 aaPredicted RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 TSPAN31Q12999 210 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 MALLQ13021 153 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 PDLIM3Q53GG5 364 aaPredicted RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 FIP1L1Q6UN15 594 aaKnown RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 ZNF826PQ6ZT77 177 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 WDR86Q86TI4 376 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 GCSAMQ8N6F7 178 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 KIR3DL3Q8N743 410 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 OR2AJ1Q8NGZ0 328 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 TECTBQ96PL2 329 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 PCGF1Q9BSM1 259 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 CHID1Q9BWS9 393 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 TNFRSF19Q9NS68 423 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 KCNG2Q9UJ96 466 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 A0A1B0GW55 424 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 ZNF879B4DU55 563 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 C3orf80F5H4A9 247 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 IDH3BO43837 385 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 FKBP6O75344 327 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4L2P0CJ85 424 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4L3P0CJ86 424 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4L4P0CJ87 422 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4L5P0CJ88 424 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4L6P0CJ89 424 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4L7P0CJ90 424 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 HOXB6P17509 224 aaKnown RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 MAGEA2P43356 314 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 NPY4RP50391 375 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 RAG2P55895 527 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DEFA6Q01524 100 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 GPR157Q5UAW9 335 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 ZNF770Q6IQ21 691 aaPredicted RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4L9Q6RFH8 374 aaPredicted RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 RHOUQ7L0Q8 258 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 FAM90A1Q86YD7 464 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 BOLLQ8N9W6 283 aaKnown RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 OR9Q2Q8NGE9 314 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 OR51L1Q8NGJ5 315 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 GNPDA2Q8TDQ7 276 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 SPRYD4Q8WW59 207 aaPredicted RBP13.13□□□□□ -0.31
PDGFA-201ENST00000354513 RASSF4Q9H2L5 321 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 YY1AP1Q9H869 796 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 FN3KRPQ9HA64 309 aa13.13□□□□□ -0.31
PDGFA-201ENST00000354513 DUX4Q9UBX2 424 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms