RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 TOMM40LQ969M1 308 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 MS4A7Q9GZW8 240 aaPredicted RBP9.22□□□□□ -0.93
SMPD4-201ENST00000351288 SPG11Q96JI7 2443 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 IGLV1-36A0A0B4J1U3 117 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 YKT6O15498 198 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 XRCC3O43542 346 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 ECDO95905 644 aaPredicted RBP9.22□□□□□ -0.93
SMPD4-201ENST00000351288 MT-CO3P00414 261 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 IGF2P01344 180 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 RAB40ALP0C0E4 278 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 GNB3P16520 340 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 SCRN3Q0VDG4 424 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 PLPPR5Q32ZL2 321 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 BPIFB2Q8N4F0 458 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 GALNT11Q8NCW6 608 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 OR2M3Q8NG83 312 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 RAB40AQ8WXH6 277 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 SLC6A15Q9H2J7 730 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 TMEM9BQ9NQ34 198 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 UBQLN2Q9UHD9 624 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 NOSIPQ9Y314 301 aaKnown RBP9.22□□□□□ -0.93
SMPD4-201ENST00000351288 PCDHGA1Q9Y5H4 931 aa9.22□□□□□ -0.93
SMPD4-201ENST00000351288 SDCBPO00560 298 aaPredicted RBP9.21□□□□□ -0.93
SMPD4-201ENST00000351288 NDUFB6O95139 128 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 FXYD4P59646 89 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 CEACAM16Q2WEN9 425 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 STEAP1BQ6NZ63 245 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 HEATR1Q9H583 2144 aaKnown RBP9.21□□□□□ -0.93
SMPD4-201ENST00000351288 H7C417 338 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 PDGFAP04085 211 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 RFPL3SP0C7P2 107 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 MTCP1P56278 107 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 EGR3Q06889 387 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 TRAPPC6BQ86SZ2 158 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 OXGR1Q96P68 337 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 ACTR6Q9GZN1 396 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 MRPS28Q9Y2Q9 187 aaKnown RBP9.21□□□□□ -0.93
SMPD4-201ENST00000351288 R4GMQ9 66 aa9.21□□□□□ -0.93
SMPD4-201ENST00000351288 A0A0J9YW62 118 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 TOX3O15405 576 aaPredicted RBP9.21□□□□□ -0.94
SMPD4-201ENST00000351288 EFNA2O43921 213 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 PMP2P02689 132 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 ICAM2P13598 275 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 AMY2BP19961 511 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 PXDC1Q5TGL8 231 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 ANKRD16Q6P6B7 361 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 C20orf196Q8IYI0 205 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 MAML2Q8IZL2 1156 aaPredicted RBP9.21□□□□□ -0.94
SMPD4-201ENST00000351288 ASB10Q8WXI3 467 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 ACKR4Q9NPB9 350 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 PIGLQ9Y2B2 252 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.94
SMPD4-201ENST00000351288 CHD8Q9HCK8 2581 aa9.21□□□□□ -0.94
SMPD4-201ENST00000351288 TRBV5-7A0A0A0MS05 114 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 A0A1W2PQD3 144 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 C5orf63A6NC05 138 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 ACSM4P0C7M7 580 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 NFYAP23511 347 aaPredicted RBP9.2□□□□□ -0.94
SMPD4-201ENST00000351288 BAMBIQ13145 260 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 PCOLCEQ15113 449 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 TIPARPQ7Z3E1 657 aaKnown RBP9.2□□□□□ -0.94
SMPD4-201ENST00000351288 WDR5BQ86VZ2 330 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 PRR18Q8N4B5 295 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 OR1J2Q8NGS2 313 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 ZNF519Q8TB69 540 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 FNDC9Q8TBE3 224 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
SMPD4-201ENST00000351288 FOXJ2Q9P0K8 574 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 BOKQ9UMX3 212 aaPredicted RBP9.2□□□□□ -0.94
SMPD4-201ENST00000351288 LOC100289279A0A1B0GTE1 492 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 A0A1B0GUH1 482 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 RPS10-NUDT3A0A1W2PQS6 291 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 CTDSPLO15194 276 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 DHHO43323 396 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 CBR3O75828 277 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 DXOO77932 396 aaKnown RBP9.2□□□□□ -0.94
SMPD4-201ENST00000351288 SCGB1D2O95969 90 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 ITGB2P05107 769 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 ACHEP22303 614 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 MAP2K6P52564 334 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 RSU1Q15404 277 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 THEM4Q5T1C6 240 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 C3P1Q6ZMU1 363 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 ZNF454Q8N9F8 522 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 WDSUB1Q8N9V3 476 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 NOXO1Q8NFA2 376 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 ELP5Q8TE02 316 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 RNF128Q8TEB7 428 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 LRFN5Q96NI6 719 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 DMRTA2Q96SC8 542 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 NICN1Q9BSH3 213 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 PARPBPQ9NWS1 579 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 MAB21L2Q9Y586 359 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 NUP210LQ5VU65 1888 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 MEGF11A6BM72 1044 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 M0R135 149 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 TXNDC12O95881 172 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 IFNA7P01567 189 aa9.2□□□□□ -0.94
SMPD4-201ENST00000351288 NR2C1P13056 603 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms