RNA–Protein interactions for RNA: ENST00000350612.10

SUPT20H-201, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT20H, Length 2,739 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-201ENST00000350612 SLC2A1P11166 492 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 ARR3P36575 388 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 EFNB2P52799 333 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 SRSF6Q13247 344 aaKnown RBP13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 DEFB109BQ30KR1 87 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 ZNF774Q6NX45 483 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 BTN2A1Q7KYR7 527 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 OR4D6Q8NGJ1 314 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 OR13C9Q8NGT0 318 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 FAM46BQ96A09 425 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 UPB1Q9UBR1 384 aa13.63□□□□□ -0.23
SUPT20H-201ENST00000350612 WDR87Q6ZQQ6 2873 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 MED13Q9UHV7 2174 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 TMEM14DPA8MWL7 114 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 RBBP9O75884 186 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 DHFRP00374 187 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 HTR5AP47898 357 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 ACTBP60709 375 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 ACTG1P63261 375 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 ZADH2Q8N4Q0 377 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 CALHM2Q9HA72 323 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 PLSCR2Q9NRY7 297 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 TMIGD3P0DMS9 266 aaPredicted RBP13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 PRSS3P35030 304 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 ARF1P84077 181 aaKnown RBP13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 TATDN3Q17R31 274 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 ASCL5Q7RTU5 278 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 PNLDC1Q8NA58 520 aaKnown RBP13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 SPSB4Q96A44 273 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 C1QTNF5Q9BXJ0 243 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 HRASLSQ9HDD0 168 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 CLCF1Q9UBD9 225 aa13.62□□□□□ -0.23
SUPT20H-201ENST00000350612 CACNA1HO95180 2353 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 TCRBP04435 133 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 CHRM2P08172 466 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 AGTR1P30556 359 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 SRP9P49458 86 aaKnown RBP13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 RAB25P57735 213 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 PLA2G7Q13093 441 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 SEMA6DQ8NFY4 1073 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 GPX8Q8TED1 209 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 SPSB1Q96BD6 273 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 SGK3Q96BR1 496 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 ZNF224Q9NZL3 707 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 CNOT4O95628 575 aaKnown RBP13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 LPLP06858 475 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 ABOP16442 354 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 OR3A2P47893 321 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 PMPCAQ10713 525 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 COLCA1Q6ZS62 124 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 KCNG3Q8TAE7 436 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 CACNG6Q9BXT2 260 aa13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 MRPS28Q9Y2Q9 187 aaKnown RBP13.61□□□□□ -0.23
SUPT20H-201ENST00000350612 NCOA6Q14686 2063 aaPredicted RBP13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 TRAV18A0A075B6X5 111 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 A0A0B4J293 547 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 C7orf66A4D0T2 115 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 CCNKO75909 580 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 UBE2J2Q8N2K1 259 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 OR56B4Q8NH76 319 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 NANOS1Q8WY41 292 aaKnown RBP13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 SLC7A6Q92536 515 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 SARAFQ96BY9 339 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 OPA3Q9H6K4 179 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 ALG5Q9Y673 324 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 TTC28Q96AY4 2481 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 VPS13AQ96RL7 3174 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 E9PLN8 166 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 PRAF2O60831 178 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 MELTFP08582 738 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 MPGP29372 298 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 RIPPLY1Q0D2K3 151 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 AWAT2Q6E213 333 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 BIVMQ86UB2 503 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 CCDC36Q8IYA8 594 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 OR6F1Q8NGZ6 308 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 REEP6Q96HR9 211 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 ZNF221Q9UK13 617 aa13.6□□□□□ -0.23
SUPT20H-201ENST00000350612 HCKP08631 526 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 PRKACBP22694 351 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 ZNF169Q14929 603 aaPredicted RBP13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 CNN3Q15417 329 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 SF3B4Q15427 424 aaKnown RBP eCLIP13.59□□□□□ -0.235e-6■■■□□ 16.4
SUPT20H-201ENST00000350612 PABPC1L2AQ5JQF8 200 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 RPUSD3Q6P087 351 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 TMEM229BQ8NBD8 167 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 AQP3Q92482 292 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 TRAF4Q9BUZ4 470 aaPredicted RBP13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 PIGLQ9Y2B2 252 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 ARHGAP21Q5T5U3 1957 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 OR14I1A6ND48 311 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 DBHP09172 617 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 VSIG8P0DPA2 414 aa13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 MECP2P51608 486 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-201ENST00000350612 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms