RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MALSU1Q96EH3 234 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 MESP1Q9BRJ9 268 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 POMT1Q9Y6A1 747 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 A0A0A6YYH2 397 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 TCRBV21S2A2A0A5A6 115 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 A6NJ64 397 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 HOXB5P09067 269 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 GNB3P16520 340 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 HOXA5P20719 270 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF141Q15928 474 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 TMEM128Q5BJH2 165 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 CLEC18BQ6UXF7 455 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF565Q8N9K5 539 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 MEGF10Q96KG7 1140 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 LPAR4Q99677 370 aa16.62■□□□□ 0.25
SCARF1-202ENST00000348987 METTL8Q9H825 291 aaKnown RBP16.62■□□□□ 0.25
SCARF1-202ENST00000348987 VPS13AQ96RL7 3174 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 IFNA17P01571 189 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 IGFBP3P17936 291 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 HHEXQ03014 270 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 KIAA0141Q14154 515 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF239Q16600 458 aaKnown RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 NSUN5P2Q63ZY6 315 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 CBLN3Q6UW01 205 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 ANGPTL5Q86XS5 388 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 BCORP1Q8N888 145 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 SLC25A43Q8WUT9 341 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 PIGQQ9BRB3 760 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 TSPAN15O95858 294 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 GPR3P46089 330 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 NPY4RP50391 375 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 EIF5AP63241 154 aaKnown RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 RPL18Q07020 188 aaKnown RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 EEF1A1P5Q5VTE0 462 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 OR2A2Q6IF42 318 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 FDX2Q6P4F2 183 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 TMEM184AQ6ZMB5 413 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 HOGA1Q86XE5 327 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 TMEM230Q96A57 120 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 CHST5Q9GZS9 411 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 EIF5A2Q9GZV4 153 aaKnown RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 C5orf66Q9H5L9 145 aa16.61■□□□□ 0.25
SCARF1-202ENST00000348987 TMEM184BQ9Y519 407 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-202ENST00000348987 SERINC4A6NH21 518 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 GMFGO60234 142 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 AKT2P31751 481 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 CD226Q15762 336 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF679Q8IYX0 411 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 PRDM13Q9H4Q3 707 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 SDHAF3Q9NRP4 125 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 STARD10Q9Y365 291 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 CXorf65A6NEN9 183 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 LMX1BO60663 402 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 RENP00797 406 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 TNFP01375 233 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 GABRG2P18507 467 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 S100A2P29034 98 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 LTBRP36941 435 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 CDX1P47902 265 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-202ENST00000348987 DNASE1L1P49184 302 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 CCR4P51679 360 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 RIDAP52758 137 aaKnown RBP16.6■□□□□ 0.25
SCARF1-202ENST00000348987 NDUFA6P56556 154 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 ANKRD55Q3KP44 614 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 MIDNQ504T8 468 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 TEX30Q5JUR7 227 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 TTLL10Q6ZVT0 673 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 OR56B1Q8NGI3 324 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 CD300LFQ8TDQ1 290 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 Q9N2J8 555 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 RAB18Q9NP72 206 aa16.6■□□□□ 0.25
SCARF1-202ENST00000348987 ATXN7L1Q9ULK2 861 aaPredicted RBP16.6■□□□□ 0.25
SCARF1-202ENST00000348987 C17orf51A8MQB3 221 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 UMAD1C9J7I0 102 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 H7C1Q1 480 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 NME2P1O60361 137 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 IGHV4-34P06331 123 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 NDUFB7P17568 137 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 TAS2R31P59538 309 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 GUK1Q16774 197 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 TMEM268Q5VZI3 342 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 Q6ZS52 159 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 OR2I1PQ8NGU4 316 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 SMIM3Q9BZL3 60 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 MMP25Q9NPA2 562 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-202ENST00000348987 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.59■□□□□ 0.25
SCARF1-202ENST00000348987 B4DGG1 531 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 NUDT21O43809 227 aaKnown RBP16.59■□□□□ 0.25
SCARF1-202ENST00000348987 SPARCP09486 303 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 HKR1P10072 659 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 SNCAP37840 140 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 RPS10P46783 165 aaKnown RBP16.59■□□□□ 0.25
SCARF1-202ENST00000348987 YPEL5P62699 121 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 ACTBL2Q562R1 376 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 MARCH3Q86UD3 253 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 OOSP2Q86WS3 158 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 ZNF321PQ8N8H1 164 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 OR13C3Q8NGS6 347 aa16.59■□□□□ 0.25
SCARF1-202ENST00000348987 OR4K15Q8NH41 348 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms