RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SULF2Q8IWU5 870 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 MKXQ8IYA7 352 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 SIRT6Q8N6T7 355 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 FAM174AQ8TBP5 190 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 ADAT1Q9BUB4 502 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 PHIPQ8WWQ0 1821 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 DLEU1O43261 78 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 GPR137BO60478 399 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 EFNA3P52797 238 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 PCBD1P61457 104 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 PPIAP62937 165 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 GRB2P62993 217 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 IFITM3Q01628 133 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 FBXW12Q6X9E4 464 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 HAVCR2Q8TDQ0 301 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TSLPQ969D9 159 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TCRBV5S1A1TA0A578 114 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 CYC1P08574 325 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 NUBP1P53384 320 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 ATP1B3P54709 279 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 LIM2P55344 173 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TTC32Q5I0X7 151 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 DPPA3Q6W0C5 159 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 LINC01465Q8N7H1 131 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 OR51S1Q8NGJ8 323 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 CLCF1Q9UBD9 225 aa10.08□□□□□ -0.8
SMARCE1-202ENST00000348513 TMEM265A0A087WTH1 108 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 GNG7O60262 68 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ZNF354AO60765 605 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 TSPAN31Q12999 210 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 C9orf50Q5SZB4 431 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC26A10Q8NG04 563 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 CCL4L1Q8NHW4 92 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 UBTD2Q8WUN7 234 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 TMEM174Q8WUU8 243 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ARSGQ96EG1 525 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 C2orf88Q9BSF0 95 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 WASHC3Q9Y3C0 194 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ITGB4P16144 1822 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 SOCS6O14544 535 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 OPRD1P41143 372 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ABI3BPQ7Z7G0 1075 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ZNF573Q86YE8 665 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 OR11H7Q8NGC8 314 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 FGGYQ96C11 551 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 STARD4Q96DR4 205 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 MYEOVQ96EZ4 313 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 MRGPRX4Q96LA9 322 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 KCNJ15Q99712 375 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 NDUFAF3Q9BU61 184 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ZCCHC4Q9H5U6 513 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ZNF331Q9NQX6 463 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 CD300LBA8K4G0 201 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 MASP2O00187 686 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 SELENOPP49908 381 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 RIPPLY3P57055 190 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ABHD17CQ6PCB6 329 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC38A9Q8NBW4 561 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 SECTM1Q8WVN6 248 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 MIB2Q96AX9 1013 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 TEX37Q96LM6 180 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ALG12Q9BV10 488 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 C1orf198Q9H425 327 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 A0A1B0GWA3 101 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 PRKNO60260 465 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 OPN1MWP04001 364 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 OPN1MW2P0DN77 364 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 OPN1MW3P0DN78 364 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 MYF5P13349 255 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 PPP1CBP62140 327 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 MEP1BQ16820 701 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC48A1Q6P1K1 146 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 PRICKLE2Q7Z3G6 844 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 BATF2Q8N1L9 274 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ZNF426Q9BUY5 554 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 PHF7Q9BWX1 381 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 HS3ST3A1Q9Y663 406 aa10.07□□□□□ -0.8
SMARCE1-202ENST00000348513 ALOX12BO75342 701 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 RRADP55042 308 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 RPS18P62269 152 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 OGFOD3Q6PK18 319 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 TSEN54Q7Z6J9 526 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 OR52B4Q8NGK2 314 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 ZNF583Q96ND8 569 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 TBX21Q9UL17 535 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 COL16A1Q07092 1604 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 PLPP1O14494 284 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 NRG2O14511 850 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 NDUFA2O43678 99 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 HPNP05981 417 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 CD1CP29017 333 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 MPGP29372 298 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 SOX18P35713 384 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 MTCP1P56278 107 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 MRM1Q6IN84 353 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 SLC16A11Q8NCK7 471 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 TMEM30AQ9NV96 361 aa10.06□□□□□ -0.8
SMARCE1-202ENST00000348513 EHFQ9NZC4 300 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms