RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 EMG1Q92979 244 aaKnown RBP13.24□□□□□ -0.29
NUP50-201ENST00000347635 THOC3Q96J01 351 aaKnown RBP13.24□□□□□ -0.29
NUP50-201ENST00000347635 SGCZQ96LD1 299 aa13.24□□□□□ -0.29
NUP50-201ENST00000347635 KLF13Q9Y2Y9 288 aaPredicted RBP13.24□□□□□ -0.29
NUP50-201ENST00000347635 OR6C65A6NJZ3 312 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 MRPL33O75394 65 aaKnown RBP13.23□□□□□ -0.29
NUP50-201ENST00000347635 TNFSF15O95150 251 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 ABOP16442 354 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 FCGR2CP31995 323 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 STARD6P59095 220 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 ZNF266Q14584 549 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 OR9K2Q8NGE7 335 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 OR5M8Q8NGP6 311 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 ST7LQ8TDW4 575 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 APOBEC4Q8WW27 367 aaKnown RBP13.23□□□□□ -0.29
NUP50-201ENST00000347635 ARL5BQ96KC2 179 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 A0A0B4J293 547 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 ISXQ2M1V0 245 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 Q5BKY6 102 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 IL34Q6ZMJ4 242 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 C20orf24Q9BUV8 137 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 C1QTNF6Q9BXI9 259 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 WWTR1Q9GZV5 400 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 TMEM184BQ9Y519 407 aaPredicted RBP13.23□□□□□ -0.29
NUP50-201ENST00000347635 C9orf170A2RU37 121 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 OTOL1A6NHN0 477 aaPredicted RBP13.23□□□□□ -0.29
NUP50-201ENST00000347635 CYR61O00622 381 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 MSTNO14793 375 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 OR7C1O76099 320 aaPredicted RBP13.23□□□□□ -0.29
NUP50-201ENST00000347635 FCARP24071 287 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 RPS18P62269 152 aaKnown RBP13.23□□□□□ -0.29
NUP50-201ENST00000347635 LGI3Q8N145 548 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 TMPRSS13Q9BYE2 586 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 CLINT1Q14677 625 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 TOMM34Q15785 309 aaPredicted RBP13.23□□□□□ -0.29
NUP50-201ENST00000347635 PHLDA2Q53GA4 152 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 MESTQ5EB52 335 aa13.23□□□□□ -0.29
NUP50-201ENST00000347635 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 TNFSF12O43508 249 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 TNFSF14O43557 240 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 NME2P1O60361 137 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 CXCL2P19875 107 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 STK11Q15831 433 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 OR11G2Q8NGC1 345 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 OR4D6Q8NGJ1 314 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 OR52H1Q8NGJ2 320 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 LHFPL5Q8TAF8 219 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 CPNE4Q96A23 557 aaPredicted RBP13.22□□□□□ -0.29
NUP50-201ENST00000347635 VSTM2LQ96N03 204 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 EPOPA6NHQ4 379 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 SLC33A1O00400 549 aaPredicted RBP13.22□□□□□ -0.29
NUP50-201ENST00000347635 GPR137BO60478 399 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 CBR1P16152 277 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 CD96P40200 585 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 OR11H4Q8NGC9 324 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 OR5L1Q8NGL2 311 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 OR13C8Q8NGS7 320 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 LOXL4Q96JB6 756 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 A0A1B0GTQ1 180 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 MT-CO3P00414 261 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 QDPRP09417 244 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 ENPP1P22413 925 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 ZNF684Q5T5D7 378 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 LFNGQ8NES3 379 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 RHOFQ9HBH0 211 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 BET1O15155 118 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 TLE4Q04727 773 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 PNLIPRP3Q17RR3 467 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 HIST2H3AQ71DI3 136 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 ARHGEF39Q8N4T4 335 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 ARRDC1Q8N5I2 433 aa13.22□□□□□ -0.29
NUP50-201ENST00000347635 SHISA3A0PJX4 238 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 C4orf51C9J302 202 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 ATG12O94817 140 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 VAMP5O95183 116 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 NAT1P18440 290 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 F2RL1P55085 397 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 CBLN3Q6UW01 205 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 FBXW5Q969U6 566 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 MMP26Q9NRE1 261 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 TRAV8-7A0A075B6U6 113 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 IGF2P01344 180 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 OR13C7P0DN81 318 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 NOVA1P51513 510 aaKnown RBP13.21□□□□□ -0.29
NUP50-201ENST00000347635 SUMO3P55854 103 aaPredicted RBP13.21□□□□□ -0.29
NUP50-201ENST00000347635 CARD18P57730 90 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 GUSBP11Q6P575 273 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 WDR74Q6RFH5 385 aaPredicted RBP13.21□□□□□ -0.29
NUP50-201ENST00000347635 LINC00696Q6ZRV3 163 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 ATG4DQ86TL0 474 aaPredicted RBP13.21□□□□□ -0.29
NUP50-201ENST00000347635 GPR119Q8TDV5 335 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 KCNIP1Q9NZI2 227 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 OR4C45A6NMZ5 311 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 TMIGD3P0DMS9 266 aaPredicted RBP13.21□□□□□ -0.29
NUP50-201ENST00000347635 ACAA2P42765 397 aaKnown RBP13.21□□□□□ -0.29
NUP50-201ENST00000347635 NANOS3P60323 173 aaKnown RBP13.21□□□□□ -0.29
NUP50-201ENST00000347635 SLC16A14Q7RTX9 510 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 PRR18Q8N4B5 295 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 CMBLQ96DG6 245 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms