RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MIOXQ9UGB7 285 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 CACFD1Q9UGQ2 172 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 ZNF346Q9UL40 294 aaKnown RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 ANAPC10Q9UM13 185 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 B9D1Q9UPM9 204 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 R4GMQ9 66 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 HEATR5AQ86XA9 2040 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 RAB27BO00194 218 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 ICOSLGO75144 302 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 CST4P01036 141 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 IGHV2-70P01814 119 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 IGHV2-5P01817 119 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 CTSBP07858 339 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 ZNF44P15621 663 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 ZNF14P17017 642 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 SLC6A8P48029 635 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 RAB5CP51148 216 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 CFHR1Q03591 330 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 KCNAB1Q14722 419 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 VAX1Q5SQQ9 334 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 NPSR1Q6W5P4 371 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 JAGN1Q8N5M9 183 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 BCORP1Q8N888 145 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 OR4N2Q8NGD1 307 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 OR13C3Q8NGS6 347 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 LYPD6BQ8NI32 183 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 RRNAD1Q96FB5 475 aaKnown RBP14.14□□□□□ -0.15
HMGA1-202ENST00000347617 C2orf50Q96LR7 162 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 SLC22A13Q9Y226 551 aa14.14□□□□□ -0.15
HMGA1-202ENST00000347617 SMAD9O15198 467 aaKnown RBP14.13□□□□□ -0.15
HMGA1-202ENST00000347617 MED6O75586 246 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 F13BP05160 661 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 CSN2P05814 226 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 CHRM2P08172 466 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 LIPCP11150 499 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 ARL4DP49703 201 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 RAB1AP62820 205 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 FNDC7Q5VTL7 733 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 DBX2Q6ZNG2 339 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 C1QL4Q86Z23 238 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 ADAD2Q8NCV1 583 aaKnown RBP14.13□□□□□ -0.15
HMGA1-202ENST00000347617 OR4S1Q8NGB4 309 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 TERB2Q8NHR7 220 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 WNT2BQ93097 391 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 C8orf44Q96CB5 159 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 AMELYQ99218 206 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 TAF9BQ9HBM6 251 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 VSX1Q9NZR4 365 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-202ENST00000347617 CGGBP1Q9UFW8 167 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-202ENST00000347617 FAM96BQ9Y3D0 163 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 DMRT1Q9Y5R6 373 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 FLVCR1Q9Y5Y0 555 aa14.13□□□□□ -0.15
HMGA1-202ENST00000347617 FAM157AC9JC47 383 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 H0YIZ8 118 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 AP4M1O00189 453 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 HLA-DQA2P01906 255 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 GSTP1P09211 210 aaKnown RBP14.12□□□□□ -0.15
HMGA1-202ENST00000347617 CPT2P23786 658 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 HRH1P35367 487 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 MAS1LP35410 378 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 PPM1FP49593 454 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-202ENST00000347617 FABP9Q0Z7S8 132 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 MOGAT2Q3SYC2 334 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 DEGS2Q6QHC5 323 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 LRRC69Q6ZNQ3 347 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 LSRQ86X29 649 aaPredicted RBP14.12□□□□□ -0.15
HMGA1-202ENST00000347617 PHOSPHO1Q8TCT1 267 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 PRTFDC1Q9NRG1 225 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 UBQLN4Q9NRR5 601 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 DHCR7Q9UBM7 475 aaKnown RBP14.12□□□□□ -0.15
HMGA1-202ENST00000347617 PRODH2Q9UF12 536 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 MMACHCQ9Y4U1 282 aa14.12□□□□□ -0.15
HMGA1-202ENST00000347617 C4orf47A7E2U8 309 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 JTBO76095 146 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 PNPP00491 289 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 PLGP00747 810 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 MT-ATP6P00846 226 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 FPR2P25090 351 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 PPT1P50897 306 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 SKP2Q13309 424 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 RHEBQ15382 184 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 HLA-BQ31612 363 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 OPN5Q6U736 354 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 RBMS3Q6XE24 437 aaKnown RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 DGAT2L6Q6ZPD8 337 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 HIST2H3AQ71DI3 136 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 WDSUB1Q8N9V3 476 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 ACBD4Q8NC06 268 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 OR52N5Q8NH56 324 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 MMABQ96EY8 250 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CPNE2Q96FN4 548 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CLCC1Q96S66 551 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 OPA3Q9H6K4 179 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 CUTCQ9NTM9 273 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 GPR132Q9UNW8 380 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 RPH3AQ9Y2J0 694 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 RHBDD3Q9Y3P4 386 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.11□□□□□ -0.15
HMGA1-202ENST00000347617 DCDC2BA2VCK2 349 aa14.11□□□□□ -0.15
HMGA1-202ENST00000347617 PRSS37A4D1T9 235 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms