RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TMEM251Q8N6I4 163 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 MDS2Q8NDY4 140 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 C19orf18Q8NEA5 215 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SLC25A38Q96DW6 304 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SF3B5Q9BWJ5 86 aaKnown RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 RBM24Q9BX46 236 aaKnown RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SLC6A15Q9H2J7 730 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 B3GNT2Q9NY97 397 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 TAS2R4Q9NYW5 299 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 OR5V1Q9UGF6 321 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 FLVCR1Q9Y5Y0 555 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SPTBN2O15020 2390 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 BOD1L1Q8NFC6 3051 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 OR5H15A6NDH6 313 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ANXA2P2A6NMY6 339 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 HLA-DQB1P01920 261 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ITGB2P05107 769 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ANXA2P07355 339 aaKnown RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SP1P08047 785 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ACSM4P0C7M7 580 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SLC2A1P11166 492 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ACHEP22303 614 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 MEOX1P50221 254 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 LHX2P50458 406 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 PRKXP51817 358 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF133P52736 654 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 PLGLB1Q02325 96 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 PLA2G7Q13093 441 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 RNASE12Q5GAN4 147 aaKnown RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 UBE2NLQ5JXB2 153 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ABLIM2Q6H8Q1 611 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SLC25A25Q6KCM7 469 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 KLHL24Q6TFL4 600 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ASB18Q6ZVZ8 466 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SERPINA12Q8IW75 414 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 C20orf196Q8IYI0 205 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 LRRC18Q8N456 261 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 OR13C3Q8NGS6 347 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ABHD3Q8WU67 409 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 NABP1Q96AH0 204 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 PBOV1Q9GZY1 135 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 HDHD2Q9H0R4 259 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 MMP28Q9H239 520 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 DDX28Q9NUL7 540 aaKnown RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 B4GALT7Q9UBV7 327 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 HHLA2Q9UM44 414 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 MRPS7Q9Y2R9 242 aaKnown RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 DCHS1Q96JQ0 3298 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 DOCK7Q96N67 2140 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF878C9JN71 531 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 DHHO43323 396 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 EEF1E1O43324 174 aaKnown RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 NME2P1O60361 137 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 GLSO94925 669 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 TTRP02766 147 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ISG15P05161 165 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 LIPCP11150 499 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 CSRP1P21291 193 aaKnown RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 MSR1P21757 451 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 HSD11B1P28845 292 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 CLDN18P56856 261 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ENDOGQ14249 297 aaKnown RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 TAF13Q15543 124 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ATAD3CQ5T2N8 411 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 PYHIN1Q6K0P9 492 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 PRSS45Q7RTY3 260 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 TMPRSS7Q7RTY8 843 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 GLCCI1Q86VQ1 547 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 OR51A2Q8NGJ7 313 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 SVIPQ8NHG7 77 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 MARC2Q969Z3 335 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ZFP3Q96NJ6 502 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 THAP7Q9BT49 309 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 TRAF4Q9BUZ4 470 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ULBP2Q9BZM5 246 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 SLC22A4Q9H015 551 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 PPA2Q9H2U2 334 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 NELFAQ9H3P2 528 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 MYO7BQ6PIF6 2116 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 SCGB1D2O95969 90 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ITGA5P08648 1049 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 UBCP0CG48 685 aaKnown RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 NR2C1P13056 603 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 IGFBP3P17936 291 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 KIR2DL3P43628 341 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 NOVA1P51513 510 aaKnown RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF121P58317 390 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 LSM6P62312 80 aaKnown RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 DGCR2P98153 550 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 IKZF1Q13422 519 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF57Q68EA5 555 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 MTFR2Q6P444 385 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 FOXL2NBQ6ZUU3 175 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 LINGO2Q7L985 606 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-202ENST00000345734 SYNPRQ8TBG9 265 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 PNPLA2Q96AD5 504 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 KCNK15Q9H427 330 aa8.11□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF552Q9H707 407 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms