RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CMAHPQ9Y471 501 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 F5H5K5 113 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 H7C417 338 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SYNGR3O43761 229 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SERPINA5P05154 406 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SLC2A1P11166 492 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 FOSL1P15407 271 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 NR4A1P22736 598 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 APEX1P27695 318 aaKnown RBP11.86□□□□□ -0.51
TPM4-202ENST00000344824 APLNRP35414 380 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 LIPAP38571 399 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SLC6A9P48067 706 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 CX3CR1P49238 355 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 RPS23P62266 143 aaKnown RBP11.86□□□□□ -0.51
TPM4-202ENST00000344824 GRB2P62993 217 aaKnown RBP11.86□□□□□ -0.51
TPM4-202ENST00000344824 SLC3A1Q07837 685 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 MFGE8Q08431 387 aaPredicted RBP11.86□□□□□ -0.51
TPM4-202ENST00000344824 MLLT11Q13015 90 aaPredicted RBP11.86□□□□□ -0.51
TPM4-202ENST00000344824 ODF4Q2M2E3 257 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
TPM4-202ENST00000344824 LIPKQ5VXJ0 399 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 ARL9Q6T311 187 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 KCTD20Q7Z5Y7 419 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 DPPA2Q7Z7J5 298 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 ZNF584Q8IVC4 421 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 ZNF525Q8N782 197 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 UFD1Q92890 307 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SORCS2Q96PQ0 1159 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 ZNF442Q9H7R0 627 aa11.86□□□□□ -0.51
TPM4-202ENST00000344824 SIRT4Q9Y6E7 314 aaPredicted RBP11.86□□□□□ -0.51
TPM4-202ENST00000344824 NSD1Q96L73 2696 aaPredicted RBP11.85□□□□□ -0.51
TPM4-202ENST00000344824 ZFHX3Q15911 3703 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 LOC110117498-PIK3R3F6TDL0 507 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 ZNF254O75437 659 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 ANXA2P07355 339 aaKnown RBP11.85□□□□□ -0.51
TPM4-202ENST00000344824 ZNF35P13682 527 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 CELP19835 753 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 SWI5Q1ZZU3 235 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 ZNF829Q3KNS6 432 aaPredicted RBP11.85□□□□□ -0.51
TPM4-202ENST00000344824 DEGS2Q6QHC5 323 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 PAQR4Q8N4S7 273 aaPredicted RBP11.85□□□□□ -0.51
TPM4-202ENST00000344824 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
TPM4-202ENST00000344824 KCNJ15Q99712 375 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 WACQ9BTA9 647 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 MRPL37Q9BZE1 423 aaKnown RBP11.85□□□□□ -0.51
TPM4-202ENST00000344824 TPK1Q9H3S4 243 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 DDX28Q9NUL7 540 aaKnown RBP11.85□□□□□ -0.51
TPM4-202ENST00000344824 R4GMQ9 66 aa11.85□□□□□ -0.51
TPM4-202ENST00000344824 TRBV2A0A0J9YWF9 115 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 TMEM269A0A1B0GVZ9 245 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 A0A1W2PPW3 197 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 OR6C6A6NF89 314 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 H3BSH0 61 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 PNPP00491 289 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 ZNF121P58317 390 aaPredicted RBP11.84□□□□□ -0.51
TPM4-202ENST00000344824 TAS2R43P59537 309 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 NANOS3P60323 173 aaKnown RBP11.84□□□□□ -0.51
TPM4-202ENST00000344824 ALKBH1Q13686 389 aaKnown RBP11.84□□□□□ -0.51
TPM4-202ENST00000344824 CDK5R1Q15078 307 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 SSX1Q16384 188 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 MST1LQ2TV78 715 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 RGS7BPQ6MZT1 257 aaPredicted RBP11.84□□□□□ -0.51
TPM4-202ENST00000344824 NAA40Q86UY6 237 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 OR1J2Q8NGS2 313 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 OR13F1Q8NGS4 319 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 SPTSSAQ969W0 71 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 PPP1R14AQ96A00 147 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 COQ7Q99807 217 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 ISYNA1Q9NPH2 558 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 DUSP13Q9UII6 198 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 SLC22A13Q9Y226 551 aa11.84□□□□□ -0.51
TPM4-202ENST00000344824 ABCA1O95477 2261 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 C5orf49A4QMS7 147 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 DPPA5A6NC42 116 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 M0R135 149 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 CCRL2O00421 344 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 ERCC1P07992 297 aaPredicted RBP11.83□□□□□ -0.52
TPM4-202ENST00000344824 CD36P16671 472 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 CPEP16870 476 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 STOMP27105 288 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 KIR3DL2P43630 455 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 RGS6P49758 472 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 PPOXP50336 477 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 GDI2P50395 445 aaKnown RBP11.83□□□□□ -0.52
TPM4-202ENST00000344824 EFNA4P52798 201 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 TPTEP56180 551 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
TPM4-202ENST00000344824 ERVS71-1P61550 626 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 RPS25P62851 125 aaKnown RBP11.83□□□□□ -0.52
TPM4-202ENST00000344824 BDH1Q02338 343 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 ACSM1Q08AH1 577 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 ECH1Q13011 328 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 EFNB3Q15768 340 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 MSMPQ1L6U9 139 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 ALKBH6Q3KRA9 238 aa11.83□□□□□ -0.52
TPM4-202ENST00000344824 WDR38Q5JTN6 314 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms