RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 MCRIP1C9JLW8 97 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 L7N2F9 121 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 SULT2B1O00204 365 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 CBR3O75828 277 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 BPNT1O95861 308 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 CYB5AP00167 134 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 AMY2AP04746 511 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 QDPRP09417 244 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 NFYAP23511 347 aaPredicted RBP13.24□□□□□ -0.29
TPM3-208ENST00000341485 PRKXP51817 358 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 CAPZA1P52907 286 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 C4orf46Q504U0 113 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 ATP1A1-AS1Q5TC04 95 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 RNF144BQ7Z419 303 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 HDDC2Q7Z4H3 204 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 PCNPQ8WW12 178 aaKnown RBP13.24□□□□□ -0.29
TPM3-208ENST00000341485 FAM46BQ96A09 425 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 UQCC2Q9BRT2 126 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 PNRC2Q9NPJ4 139 aaKnown RBP13.24□□□□□ -0.29
TPM3-208ENST00000341485 ASH2LQ9UBL3 628 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 UPB1Q9UBR1 384 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 ZNF107Q9UII5 783 aaPredicted RBP13.24□□□□□ -0.29
TPM3-208ENST00000341485 TMEM82A0PJX8 343 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 METTL21EPA6NDL7 271 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 ARGFXA6NJG6 315 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
TPM3-208ENST00000341485 F5H5P2 479 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 RER1O15258 196 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 SLC2A1P11166 492 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 RAB3AP20336 220 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 ZNF121P58317 390 aaPredicted RBP13.24□□□□□ -0.29
TPM3-208ENST00000341485 KCNMB1Q16558 191 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 CLLU1Q5K131 121 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 RAET1LQ5VY80 246 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 FJX1Q86VR8 437 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 OR8B12Q8NGG6 310 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 OR5D14Q8NGL3 314 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 TNFAIP8L1Q8WVP5 186 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 NTNG2Q96CW9 530 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 SLC6A7Q99884 636 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 MOB1AQ9H8S9 216 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 ZNF319Q9P2F9 582 aa13.24□□□□□ -0.29
TPM3-208ENST00000341485 LOC102725191A0A1B0GVB3 256 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 ZNF726A6NNF4 738 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 CD96P40200 585 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 SLC35A1P78382 337 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 TAF13Q15543 124 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 RAB12Q6IQ22 244 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 LINC00696Q6ZRV3 163 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 CHMP1BQ7LBR1 199 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 ZNF584Q8IVC4 421 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
TPM3-208ENST00000341485 BPIFB2Q8N4F0 458 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 OR4S1Q8NGB4 309 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 SFXN2Q96NB2 322 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 SLC25A21Q9BQT8 299 aaPredicted RBP13.23□□□□□ -0.29
TPM3-208ENST00000341485 MAB21L2Q9Y586 359 aa13.23□□□□□ -0.29
TPM3-208ENST00000341485 A0A0G2JMM0 328 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 A0A1W2PPB8 328 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 A0A1W2PRS3 328 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 KIR3DP1A8MWS1 328 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 OR4E1P0C645 316 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 ABOP16442 354 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 ZNF20P17024 532 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 FKBP2P26885 142 aaKnown RBP13.22□□□□□ -0.29
TPM3-208ENST00000341485 RRADP55042 308 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 CLDN17P56750 224 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 SEC61A1P61619 476 aaKnown RBP13.22□□□□□ -0.29
TPM3-208ENST00000341485 MPPED2Q15777 294 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 CDNFQ49AH0 187 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 ATPAF1Q5TC12 328 aaPredicted RBP13.22□□□□□ -0.29
TPM3-208ENST00000341485 SPINK14Q6IE38 97 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 TRAPPC6BQ86SZ2 158 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 OR13C8Q8NGS7 320 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 ANGPTL6Q8NI99 470 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 CCDC107Q8WV48 283 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 SLC5A6Q9Y289 635 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 AHCTF1Q8WYP5 2266 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 OR6C65A6NJZ3 312 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 H3BUI4 141 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 PMS2P2O95744 297 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 C4BPBP20851 252 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 CNR1P21554 472 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 RHOUQ7L0Q8 258 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 ABHD12BQ7Z5M8 362 aaPredicted RBP13.22□□□□□ -0.29
TPM3-208ENST00000341485 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 RTN4RL2Q86UN3 420 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 OR5AS1Q8N127 324 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 CHST4Q8NCG5 386 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 SPACA5Q96QH8 159 aa13.22□□□□□ -0.29
TPM3-208ENST00000341485 DOCK10Q96BY6 2186 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 TMEM14DPA8MWL7 114 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 CSN2P05814 226 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 ZNF93P35789 620 aaPredicted RBP13.21□□□□□ -0.29
TPM3-208ENST00000341485 CX3CR1P49238 355 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 SCGB2B2Q4G0G5 96 aa13.21□□□□□ -0.29
TPM3-208ENST00000341485 AWAT2Q6E213 333 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms