RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 HMGB4Q8WW32 186 aa15.15■□□□□ 0.02
CDK11B-201ENST00000340677 CIB3Q96Q77 187 aaPredicted RBP15.15■□□□□ 0.02
CDK11B-201ENST00000340677 VCX2Q9H322 139 aa15.15■□□□□ 0.02
CDK11B-201ENST00000340677 SLC2A4RGQ9NR83 387 aa15.15■□□□□ 0.02
CDK11B-201ENST00000340677 P4HTMQ9NXG6 502 aa15.15■□□□□ 0.02
CDK11B-201ENST00000340677 VPS29Q9UBQ0 182 aa15.15■□□□□ 0.02
CDK11B-201ENST00000340677 OSGIN2Q9Y236 505 aa15.15■□□□□ 0.02
CDK11B-201ENST00000340677 DCTN6O00399 190 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 SLC35E2P0CK97 266 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 PGAM2P15259 253 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 MMP15P51511 669 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 SRSF7Q16629 238 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK11B-201ENST00000340677 MORN2Q502X0 79 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 SPATA19Q7Z5L4 167 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 SFTPA1Q8IWL2 248 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 SAMD12Q8N8I0 201 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 PLEKHJ1Q9NW61 149 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 SF3B6Q9Y3B4 125 aaKnown RBP15.14■□□□□ 0.01
CDK11B-201ENST00000340677 GPR39O43194 453 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 SCGB1D1O95968 90 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 CSF1P09603 554 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 OR13C7P0DN81 318 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 KIR2DL1P43626 348 aaPredicted RBP15.14■□□□□ 0.01
CDK11B-201ENST00000340677 ELLP55199 621 aaPredicted RBP15.14■□□□□ 0.01
CDK11B-201ENST00000340677 RAB38P57729 211 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 OR12D2P58182 307 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 DPTQ07507 201 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 ELOBQ15370 118 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 RBBP7Q16576 425 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 ZNF343Q6P1L6 599 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 Q6ZVL8 140 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 MRGPRGQ86SM5 289 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 CCDC71LQ8N9Z2 235 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 OR51G2Q8NGK0 314 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 OR4P4Q8NGL7 312 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 OR1N2Q8NGR9 330 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 GINS3Q9BRX5 216 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 GALPQ9UBC7 116 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 NEUROG3Q9Y4Z2 214 aa15.14■□□□□ 0.01
CDK11B-201ENST00000340677 A0A1W2PPV4 95 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 OR7C2O60412 319 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 TGFAP01135 160 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 ST6GAL1P15907 406 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 FGF9P31371 208 aaPredicted RBP15.13■□□□□ 0.01
CDK11B-201ENST00000340677 UBE2MP61081 183 aaKnown RBP15.13■□□□□ 0.01
CDK11B-201ENST00000340677 PAX2Q02962 417 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 ASPHD2Q6ICH7 369 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 RFLNAQ6ZTI6 216 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 UBALD2Q8IYN6 164 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 D2HGDHQ8N465 521 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 ZBTB2Q8N680 514 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 OR2AK2Q8NG84 335 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 KCTD12Q96CX2 325 aaKnown RBP15.13■□□□□ 0.01
CDK11B-201ENST00000340677 RAB1BQ9H0U4 201 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 ATG5Q9H1Y0 275 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 FRRS1LQ9P0K9 344 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 ABI3Q9P2A4 366 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 LPAR3Q9UBY5 353 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 RNF222A6NCQ9 220 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 ZNF814B7Z6K7 855 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 SYT7O43581 403 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 TSPAN13O95857 204 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 SERPIND1P05546 499 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 CALCBP10092 127 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 CEACAM1P13688 526 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 RHOGP84095 191 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 B4GALNT1Q00973 533 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 OR52J3Q8NH60 311 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 NETO1Q8TDF5 533 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 TMED6Q8WW62 240 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 GABRG3Q99928 467 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 MICU1Q9BPX6 476 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 PRM3Q9NNZ6 103 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 NUDT4Q9NZJ9 180 aa15.13■□□□□ 0.01
CDK11B-201ENST00000340677 NPEPPSL1A6NEC2 478 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 K7EQS6 105 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 XRCC3O43542 346 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 SLC25A14O95258 325 aaPredicted RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 RAB36O95755 333 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 ATP1B2P14415 290 aaPredicted RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 HOXB6P17509 224 aaKnown RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 AADACL3Q5VUY0 350 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 TMEM182Q6ZP80 229 aaPredicted RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 SLCO4C1Q6ZQN7 724 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 LAPTM4BQ86VI4 370 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 PROKR1Q8TCW9 393 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 RASD2Q96D21 266 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 COL25A1Q9BXS0 654 aaPredicted RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 MS4A8Q9BY19 250 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 TCEAL2Q9H3H9 227 aaPredicted RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 SIRT3Q9NTG7 399 aaPredicted RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 MRPL15Q9P015 296 aaKnown RBP15.12■□□□□ 0.01
CDK11B-201ENST00000340677 NINQ8N4C6 2090 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 TGIF2-C20orf24A0A0A6YYL0 155 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 UNC119BA6NIH7 251 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 GABRPO00591 440 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 OR10J4P0C629 311 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 PGA4P0DJD7 388 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 PGA5P0DJD9 388 aa15.12■□□□□ 0.01
CDK11B-201ENST00000340677 TNFSF4P23510 183 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms