RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SRMP19623 302 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 CAV2P51636 162 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 C21orf58P58505 322 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 MDP1Q86V88 176 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 BARX1Q9HBU1 254 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 COPS3Q9UNS2 423 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 SPTBN2O15020 2390 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 C1QTNF9BB2RNN3 333 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 C1QTNF9P0C862 333 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 TAS2R19P59542 299 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 SPARTQ8N0X7 666 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 SPICQ8N5J4 248 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 PHYHIPQ92561 330 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 AKR1E2Q96JD6 320 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 LSM5Q9Y4Y9 91 aaKnown RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 A3GALT2U3KPV4 340 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 AQP7O14520 342 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 THBS4P35443 961 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 PRDX4Q13162 271 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 FAHD2BQ6P2I3 314 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 FAHD2AQ96GK7 314 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 AIFM2Q9BRQ8 373 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 COL4A6Q14031 1691 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 A0A1W2PRD5 423 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 A0A1W2PRF3 423 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 A0A1W2PRM7 423 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 MAGEB4O15481 346 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 SNRPBP14678 240 aaKnown RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 ATF1P18846 271 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 EMX1Q04741 257 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 ZNF239Q16600 458 aaKnown RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 ZNF517Q6ZMY9 492 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 OR2AE1Q8NHA4 323 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 LRP12Q9Y561 859 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 ARRDC5A6NEK1 342 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 MT-CO2P00403 227 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 CCDC58Q4VC31 144 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 DMRTC1Q5HYR2 192 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 OR51D1Q8NGF3 324 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 OTOSQ8NHW6 89 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 RPEQ96AT9 228 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 MS4A7Q9GZW8 240 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 NECAP2Q9NVZ3 263 aa11.38□□□□□ -0.59
LIN54-201ENST00000340417 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 FNDC1Q4ZHG4 1894 aaPredicted RBP11.38□□□□□ -0.59
LIN54-201ENST00000340417 TSEN54Q7Z6J9 526 aaKnown RBP11.37□□□□□ -0.59
LIN54-201ENST00000340417 FAM26EQ8N5C1 309 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 OR6S1Q8NH40 331 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 RHOXF1Q8NHV9 184 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 AIPO00170 330 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 TO15178 435 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 GPANK1O95872 356 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 NGFRP08138 427 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 CST2P09228 141 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 CREB3L2Q70SY1 520 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 MOGAT3Q86VF5 341 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 SGK3Q96BR1 496 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 CACNG6Q9BXT2 260 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 ACKR4Q9NPB9 350 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 MGAT4CQ9UBM8 478 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 ADRA2AP08913 450 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 SUMF1Q8NBK3 374 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 SLC38A9Q8NBW4 561 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 GPR137Q96N19 417 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 ZNF251Q9BRH9 671 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 ZMIZ1Q9ULJ6 1067 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 KCNMB2Q9Y691 235 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 E9PI62 339 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 TMPRSS2O15393 492 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 SPRY1O43609 319 aaPredicted RBP11.37□□□□□ -0.59
LIN54-201ENST00000340417 CBFA2T3O75081 653 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 SLC25A1P53007 311 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 RPL23AP62750 156 aaKnown RBP11.37□□□□□ -0.59
LIN54-201ENST00000340417 TSPO2Q5TGU0 170 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 CALHM3Q86XJ0 350 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 GPR32P1Q8NGA4 272 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 CREB3L1Q96BA8 519 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 HPGDSO60760 199 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 OR4M1Q8NGD0 313 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 LGALS14Q8TCE9 139 aa11.37□□□□□ -0.59
LIN54-201ENST00000340417 PCDHGA9Q9Y5G4 932 aaKnown RBP11.37□□□□□ -0.59
LIN54-201ENST00000340417 ANGPTL7O43827 346 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 CREBL2O60519 120 aaPredicted RBP11.36□□□□□ -0.59
LIN54-201ENST00000340417 DMRTB1Q96MA1 342 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 SLC23A1Q9UHI7 598 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 ZAR1LA6NP61 321 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 M0QZ24 198 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 RPA2P15927 270 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 TCF15Q12870 199 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 OR10AD1Q8NGE0 317 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 ZNF728P0DKX0 622 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 BPIFB2Q8N4F0 458 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 PP6455Q8WZ26 134 aa11.36□□□□□ -0.59
LIN54-201ENST00000340417 ST3GAL6Q9Y274 331 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms