RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 KLHDC2Q9Y2U9 406 aa13.14□□□□□ -0.31
RET-201ENST00000340058 TIMM10BQ9Y5J6 103 aa13.14□□□□□ -0.31
RET-201ENST00000340058 GMDSO60547 372 aa13.14□□□□□ -0.31
RET-201ENST00000340058 ZIC2O95409 532 aaPredicted RBP13.14□□□□□ -0.31
RET-201ENST00000340058 MSL3P1P0C860 447 aa13.14□□□□□ -0.31
RET-201ENST00000340058 MGMTP16455 207 aa13.14□□□□□ -0.31
RET-201ENST00000340058 M6PRP20645 277 aa13.14□□□□□ -0.31
RET-201ENST00000340058 AVPR2P30518 371 aa13.14□□□□□ -0.31
RET-201ENST00000340058 SLC25A1P53007 311 aa13.14□□□□□ -0.31
RET-201ENST00000340058 IL11RAQ14626 422 aa13.14□□□□□ -0.31
RET-201ENST00000340058 ARTNQ5T4W7 220 aa13.14□□□□□ -0.31
RET-201ENST00000340058 DMKNQ6E0U4 476 aaPredicted RBP13.14□□□□□ -0.31
RET-201ENST00000340058 OR2V1Q8NHB1 315 aa13.14□□□□□ -0.31
RET-201ENST00000340058 LRFN5Q96NI6 719 aa13.14□□□□□ -0.31
RET-201ENST00000340058 TRAV1-2A0A0B4J238 106 aa13.13□□□□□ -0.31
RET-201ENST00000340058 H7C2Y5 167 aa13.13□□□□□ -0.31
RET-201ENST00000340058 LANCL1O43813 399 aa13.13□□□□□ -0.31
RET-201ENST00000340058 CHRM2P08172 466 aa13.13□□□□□ -0.31
RET-201ENST00000340058 CLDN20P56880 219 aa13.13□□□□□ -0.31
RET-201ENST00000340058 CD276Q5ZPR3 534 aa13.13□□□□□ -0.31
RET-201ENST00000340058 MESP1Q9BRJ9 268 aa13.13□□□□□ -0.31
RET-201ENST00000340058 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
RET-201ENST00000340058 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
RET-201ENST00000340058 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
RET-201ENST00000340058 BTG1P62324 171 aa13.13□□□□□ -0.31
RET-201ENST00000340058 CDC20Q12834 499 aa13.13□□□□□ -0.31
RET-201ENST00000340058 BTN1A1Q13410 526 aa13.13□□□□□ -0.31
RET-201ENST00000340058 SLC25A21Q9BQT8 299 aaPredicted RBP13.13□□□□□ -0.31
RET-201ENST00000340058 C1QBP02746 253 aa13.13□□□□□ -0.31
RET-201ENST00000340058 TMIGD3P0DMS9 266 aaPredicted RBP13.13□□□□□ -0.31
RET-201ENST00000340058 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
RET-201ENST00000340058 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
RET-201ENST00000340058 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
RET-201ENST00000340058 FOXB1Q99853 325 aa13.13□□□□□ -0.31
RET-201ENST00000340058 ZNF2Q9BSG1 426 aaPredicted RBP13.13□□□□□ -0.31
RET-201ENST00000340058 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
RET-201ENST00000340058 K7EPK0 472 aa13.12□□□□□ -0.31
RET-201ENST00000340058 TIAF1O95411 115 aa13.12□□□□□ -0.31
RET-201ENST00000340058 EPPINO95925 133 aa13.12□□□□□ -0.31
RET-201ENST00000340058 SEMG1P04279 462 aa13.12□□□□□ -0.31
RET-201ENST00000340058 HOXB9P17482 250 aaPredicted RBP13.12□□□□□ -0.31
RET-201ENST00000340058 PRKACAP17612 351 aa13.12□□□□□ -0.31
RET-201ENST00000340058 HAAOP46952 286 aa13.12□□□□□ -0.31
RET-201ENST00000340058 CASP6P55212 293 aa13.12□□□□□ -0.31
RET-201ENST00000340058 CDONQ4KMG0 1287 aa13.12□□□□□ -0.31
RET-201ENST00000340058 PAN3Q58A45 887 aaKnown RBP13.12□□□□□ -0.31
RET-201ENST00000340058 BPHLQ86WA6 291 aaPredicted RBP13.12□□□□□ -0.31
RET-201ENST00000340058 FAM71E2Q8N5Q1 922 aa13.12□□□□□ -0.31
RET-201ENST00000340058 OR10R2Q8NGX6 335 aa13.12□□□□□ -0.31
RET-201ENST00000340058 RNF128Q8TEB7 428 aa13.12□□□□□ -0.31
RET-201ENST00000340058 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
RET-201ENST00000340058 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
RET-201ENST00000340058 WDR81Q562E7 1941 aa13.12□□□□□ -0.31
RET-201ENST00000340058 BPNT1O95861 308 aa13.12□□□□□ -0.31
RET-201ENST00000340058 ZNF32P17041 273 aa13.12□□□□□ -0.31
RET-201ENST00000340058 S100A11P31949 105 aa13.12□□□□□ -0.31
RET-201ENST00000340058 DSCR4P56555 118 aaPredicted RBP13.12□□□□□ -0.31
RET-201ENST00000340058 ZNF79Q15937 498 aa13.12□□□□□ -0.31
RET-201ENST00000340058 FAM74A1Q5RGS3 127 aa13.12□□□□□ -0.31
RET-201ENST00000340058 OR10D3Q8NH80 312 aa13.12□□□□□ -0.31
RET-201ENST00000340058 EMG1Q92979 244 aaKnown RBP13.12□□□□□ -0.31
RET-201ENST00000340058 AMELYQ99218 206 aa13.12□□□□□ -0.31
RET-201ENST00000340058 ZNF649Q9BS31 505 aa13.12□□□□□ -0.31
RET-201ENST00000340058 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
RET-201ENST00000340058 HSD17B6O14756 317 aa13.12□□□□□ -0.31
RET-201ENST00000340058 ITGB2P05107 769 aa13.12□□□□□ -0.31
RET-201ENST00000340058 PTAFRP25105 342 aa13.12□□□□□ -0.31
RET-201ENST00000340058 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
RET-201ENST00000340058 KRBOX4Q5JUW0 171 aa13.12□□□□□ -0.31
RET-201ENST00000340058 CLVS2Q5SYC1 327 aa13.12□□□□□ -0.31
RET-201ENST00000340058 HES3Q5TGS1 186 aa13.12□□□□□ -0.31
RET-201ENST00000340058 CXorf67Q86X51 503 aaPredicted RBP13.12□□□□□ -0.31
RET-201ENST00000340058 FAM219AQ8IW50 185 aa13.12□□□□□ -0.31
RET-201ENST00000340058 FBXL14Q8N1E6 418 aa13.12□□□□□ -0.31
RET-201ENST00000340058 NEUROG3Q9Y4Z2 214 aa13.12□□□□□ -0.31
RET-201ENST00000340058 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
RET-201ENST00000340058 ARF1P84077 181 aaKnown RBP13.11□□□□□ -0.31
RET-201ENST00000340058 ELFN2Q5R3F8 820 aa13.11□□□□□ -0.31
RET-201ENST00000340058 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.11□□□□□ -0.31
RET-201ENST00000340058 SLC22A25Q6T423 547 aa13.11□□□□□ -0.31
RET-201ENST00000340058 WDR89Q96FK6 387 aaPredicted RBP13.11□□□□□ -0.31
RET-201ENST00000340058 V9GYH0 126 aa13.11□□□□□ -0.31
RET-201ENST00000340058 DOCK9Q9BZ29 2069 aa13.11□□□□□ -0.31
RET-201ENST00000340058 WDR1O75083 606 aa13.11□□□□□ -0.31
RET-201ENST00000340058 TUSC2O75896 110 aa13.11□□□□□ -0.31
RET-201ENST00000340058 RGS11O94810 467 aa13.11□□□□□ -0.31
RET-201ENST00000340058 SELENOPP49908 381 aa13.11□□□□□ -0.31
RET-201ENST00000340058 ALKBH6Q3KRA9 238 aa13.11□□□□□ -0.31
RET-201ENST00000340058 SP6Q3SY56 376 aa13.11□□□□□ -0.31
RET-201ENST00000340058 OR2Y1Q8NGV0 311 aa13.11□□□□□ -0.31
RET-201ENST00000340058 TAAR9Q96RI9 348 aa13.11□□□□□ -0.31
RET-201ENST00000340058 ESRP2Q9H6T0 727 aaKnown RBP13.11□□□□□ -0.31
RET-201ENST00000340058 KLF13Q9Y2Y9 288 aaPredicted RBP13.11□□□□□ -0.31
RET-201ENST00000340058 KIF26BQ2KJY2 2108 aa13.11□□□□□ -0.31
RET-201ENST00000340058 MED6O75586 246 aa13.11□□□□□ -0.31
RET-201ENST00000340058 IGHA1P01876 353 aa13.11□□□□□ -0.31
RET-201ENST00000340058 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
RET-201ENST00000340058 SERPINF1P36955 418 aa13.11□□□□□ -0.31
RET-201ENST00000340058 MECP2P51608 486 aaKnown RBP13.11□□□□□ -0.31
RET-201ENST00000340058 ZFAND1Q8TCF1 268 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms