RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 TDHQ8IZJ6 230 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 SMIM7Q9BQ49 75 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 SNRNP200O75643 2136 aaKnown RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 A0A1W2PNV4 684 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 LINC01553A4QN01 128 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 H0YIV9 168 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 ARNTLO00327 626 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 CYS1Q717R9 158 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 CDH26Q8IXH8 852 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 COMMD1Q8N668 190 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 TMED6Q8WW62 240 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 NEURL3Q96EH8 262 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 DUS3LQ96G46 650 aaKnown RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 PSORS1C1Q9UIG5 152 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 ST3GAL6Q9Y274 331 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 DUS4LO95620 317 aaKnown RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 CSNK1DP48730 415 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 HNRNPA3P51991 378 aaKnown RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 PCBP4P57723 403 aaKnown RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 PFN3P60673 137 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 ENDOGQ14249 297 aaKnown RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 ABHD17CQ6PCB6 329 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 CCDC190Q86UF4 302 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 ALKBH3Q96Q83 286 aaPredicted RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 DDOQ99489 341 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 TMPRSS13Q9BYE2 586 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 YTHDF2Q9Y5A9 579 aaKnown RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 H3BMH7 237 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 KCNAB3O43448 404 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 NEURL1O76050 574 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 CD200P41217 278 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 OR3A4PP47883 348 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 SLC6A12P48065 614 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 ZNF121P58317 390 aaPredicted RBP10.68□□□□□ -0.7
SHANK2-201ENST00000338508 SLC51BQ86UW2 128 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 OR4C5Q8NGB2 326 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 MARCH5Q9NX47 278 aa10.68□□□□□ -0.7
SHANK2-201ENST00000338508 ATP1B1P05026 303 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 SLC25A5P05141 298 aaKnown RBP10.67□□□□□ -0.7
SHANK2-201ENST00000338508 PAX5Q02548 391 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 SLC35E4Q6ICL7 350 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 CABLES2Q9BTV7 478 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 UBE2ZQ9H832 354 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-201ENST00000338508 ZDHHC11Q9H8X9 412 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 PHRF1Q9P1Y6 1649 aaKnown RBP10.67□□□□□ -0.7
SHANK2-201ENST00000338508 RP1L1Q8IWN7 2480 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-201ENST00000338508 TRIP11Q15643 1979 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 H3BVH4 76 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 KRASP01116 189 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 ETV6P41212 452 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 IHHQ14623 411 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 RETREG3Q86VR2 466 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 DTD1Q8TEA8 209 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 RPEQ96AT9 228 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 ABHD14AQ9BUJ0 271 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 BTNL3Q6UXE8 466 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 TMEM99Q8N816 258 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 KCNE4Q8WWG9 221 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 LPAR2Q9HBW0 351 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 J3QR89 54 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
SHANK2-201ENST00000338508 CIDEAO60543 219 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 ZGLP1P0C6A0 271 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 ZBTB25P24278 435 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 DEFB124Q8NES8 71 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 WFDC5Q8TCV5 224 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 FGF22Q9HCT0 170 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 HS3ST3A1Q9Y663 406 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 MYO7AQ13402 2215 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 CTXN2P0C2S0 81 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 NME1P15531 152 aaKnown RBP10.67□□□□□ -0.7
SHANK2-201ENST00000338508 MMP11P24347 488 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 RFX2P48378 723 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 LILRB4Q8NHJ6 448 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 TMEM147Q9BVK8 224 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 PCOLCE2Q9UKZ9 415 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 FLVCR2Q9UPI3 526 aa10.67□□□□□ -0.7
SHANK2-201ENST00000338508 TRAV34A0A0B4J273 112 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 MS4A18H0YCH9 400 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 M0R1X1 148 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 ICMTO60725 284 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 EMDP50402 254 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 CNN1P51911 297 aaKnown RBP10.66□□□□□ -0.7
SHANK2-201ENST00000338508 MS4A18Q3C1V0 323 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 OR6S1Q8NH40 331 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 HPP00738 406 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 TMEM88Q6PEY1 159 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 LYG1Q8N1E2 194 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 OR5AP2Q8NGF4 316 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 KIR3DX1Q9H7L2 352 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 RBFOX1Q9NWB1 397 aaKnown RBP10.66□□□□□ -0.7
SHANK2-201ENST00000338508 IGKV6-21A0A0C4DH24 114 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 GFYI3L273 518 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 CHRM2P08172 466 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 NPPBP16860 134 aa10.66□□□□□ -0.7
SHANK2-201ENST00000338508 SLC35D3Q5M8T2 416 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms