RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 NUDT9Q9BW91 350 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 SDHBP21912 280 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 SPANXN5Q5MJ07 72 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 ADAMTS7Q9UKP4 1686 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 NEU3Q9UQ49 428 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 PPP5D1E7EU14 171 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 FFAR1O14842 300 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 ACSM4P0C7M7 580 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 PTAFRP25105 342 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 HOXC8P31273 242 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 C11orf87Q6NUJ2 197 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 RPUSD3Q6P087 351 aaKnown RBP12.39□□□□□ -0.43
RTN4-202ENST00000337526 SLC25A26Q70HW3 274 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 VN1R4Q7Z5H5 301 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 DUSP18Q8NEJ0 188 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 GPX8Q8TED1 209 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 THOC3Q96J01 351 aaKnown RBP12.39□□□□□ -0.43
RTN4-202ENST00000337526 FN3KRPQ9HA64 309 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 GNG13Q9P2W3 67 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 HDGFL3Q9Y3E1 203 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 MCM3APO60318 1980 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 LMO7DNF2Z398 122 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 H7BYZ3 331 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 FAHP16930 419 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 BAGE3Q86Y29 109 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 BAGE2Q86Y30 109 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 TMEM123Q8N131 208 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
RTN4-202ENST00000337526 OR5V1Q9UGF6 321 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 ST3GAL6Q9Y274 331 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 ATG2BQ96BY7 2078 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 XRCC2O43543 280 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 GLAP06280 429 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 THBS3P49746 956 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 H2BFWTQ7Z2G1 175 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 ST6GAL2Q96JF0 529 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 STRAPQ9Y3F4 350 aaKnown RBP12.38□□□□□ -0.43
RTN4-202ENST00000337526 IGHV3-64DA0A0J9YX35 117 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 CYB5BO43169 146 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 CTGFP29279 349 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 FZD2Q14332 565 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 LHFPL2Q6ZUX7 228 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 C1orf87Q8N0U7 546 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 PHF7Q9BWX1 381 aaPredicted RBP12.38□□□□□ -0.43
RTN4-202ENST00000337526 DLL4Q9NR61 685 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 KCNIP2Q9NS61 270 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 TRPM6Q9BX84 2022 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 SERPINE3A8MV23 424 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 ZNF468Q5VIY5 522 aaPredicted RBP12.38□□□□□ -0.43
RTN4-202ENST00000337526 TMEM71Q6P5X7 295 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 ZNF439Q8NDP4 499 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 MED9Q9NWA0 146 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 IGHV3-15A0A0B4J1V0 119 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 A0A1B0GTH9 108 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 LILRA5A6NI73 299 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 SSSCA1O60232 199 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
RTN4-202ENST00000337526 PRICKLE4Q2TBC4 344 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 OR1N1Q8NGS0 311 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 OR2AE1Q8NHA4 323 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 REEP6Q96HR9 211 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 RTL8AQ9BWD3 113 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 CRLF2Q9HC73 371 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 POLDIP2Q9Y2S7 368 aa12.38□□□□□ -0.43
RTN4-202ENST00000337526 A0A096LPE4 126 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 A0A1W2PPZ6 126 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 GABRG2P18507 467 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 SLC6A1P30531 599 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 CDAP32320 146 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 C15orf54Q8N8G6 183 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 MAGT1Q9H0U3 335 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 ADAM10O14672 748 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 TXNDC12O95881 172 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 ABCD3P28288 659 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 CDKN2AP42771 156 aaKnown RBP12.37□□□□□ -0.43
RTN4-202ENST00000337526 ANKRD16Q6P6B7 361 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 KMT5CQ86Y97 462 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 MUC20Q8N307 709 aaPredicted RBP12.37□□□□□ -0.43
RTN4-202ENST00000337526 PP6455Q8WZ26 134 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 LHX4Q969G2 390 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 ADAM19Q9H013 955 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 C5orf49A4QMS7 147 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 BTBD17A6NE02 478 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 ZNF727A8MUV8 499 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 FAM199XQ6PEV8 388 aaPredicted RBP12.37□□□□□ -0.43
RTN4-202ENST00000337526 ZFP62Q8NB50 900 aaPredicted RBP12.37□□□□□ -0.43
RTN4-202ENST00000337526 LRRC61Q9BV99 259 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 SLC17A5Q9NRA2 495 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 RAB27BO00194 218 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 ANGPTL7O43827 346 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 DHRS2Q13268 280 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 PNLIPRP3Q17RR3 467 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 PDZD11Q5EBL8 140 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 GCNT2Q8N0V5 402 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms