RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 AKR1C4P17516 323 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 VAMP1P23763 118 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 OR3A4PP47883 348 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 CX3CR1P49238 355 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 ATP1B3P54709 279 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 PPP1R3BQ86XI6 285 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 WDSUB1Q8N9V3 476 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 BVESQ8NE79 360 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 CASTOR1Q8WTX7 329 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 DUSP23Q9BVJ7 150 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 AKIRIN1Q9H9L7 192 aaPredicted RBP20.68■□□□□ 0.9
NDEL1-201ENST00000334527 PNRC2Q9NPJ4 139 aaKnown RBP20.68■□□□□ 0.9
NDEL1-201ENST00000334527 U3KQA8 63 aa20.68■□□□□ 0.9
NDEL1-201ENST00000334527 KANTRA0A1W2PQU2 76 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 ZNF726A6NNF4 738 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 TBPP20226 339 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 ATXN7L3Q14CW9 347 aaPredicted RBP20.67■□□□□ 0.9
NDEL1-201ENST00000334527 PRAMEF20Q5VT98 475 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 JMJD6Q6NYC1 403 aaPredicted RBP20.67■□□□□ 0.9
NDEL1-201ENST00000334527 PGAP1Q75T13 922 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 TMEM41AQ96HV5 264 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 VRK1Q99986 396 aaPredicted RBP20.67■□□□□ 0.9
NDEL1-201ENST00000334527 OR2F2O95006 317 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 HPP00738 406 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 CHRM2P08172 466 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 HCKP08631 526 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 HLA-GP17693 338 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 AVPR2P30518 371 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 OR2F1Q13607 317 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 ZNF345Q14585 488 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 FAM57BQ71RH2 274 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 OR2W3Q7Z3T1 314 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 HSD17B13Q7Z5P4 300 aaPredicted RBP20.67■□□□□ 0.9
NDEL1-201ENST00000334527 OR4K15Q8NH41 348 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 SLC25A43Q8WUT9 341 aaPredicted RBP20.67■□□□□ 0.9
NDEL1-201ENST00000334527 WDR13Q9H1Z4 485 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 SLC25A32Q9H2D1 315 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 FN3KRPQ9HA64 309 aa20.67■□□□□ 0.9
NDEL1-201ENST00000334527 SIGLEC6O43699 453 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 HIST3H3Q16695 136 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 FAHD2BQ6P2I3 314 aaPredicted RBP20.66■□□□□ 0.9
NDEL1-201ENST00000334527 ZNF283Q8N7M2 679 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 FAHD2AQ96GK7 314 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 C1orf147Q96MC9 270 aaPredicted RBP20.66■□□□□ 0.9
NDEL1-201ENST00000334527 BANF2Q9H503 90 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 AQP7P3A6NL99 342 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 SULT2B1O00204 365 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 SOCS1O15524 211 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 EFSO43281 561 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 CDC14BO60729 498 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 DKK1O94907 266 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 ONECUT2O95948 504 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 ZNF17P17021 662 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 DLSTP36957 453 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 BEX5Q5H9J7 111 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 KCTD9Q7L273 389 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 FADS6Q8N9I5 356 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 RAB3CQ96E17 227 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 GPR160Q9UJ42 338 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 HDGFL3Q9Y3E1 203 aa20.66■□□□□ 0.9
NDEL1-201ENST00000334527 D6RAR5 112 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 KCNMB1Q16558 191 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 PLAC9Q5JTB6 97 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 FAM74A1Q5RGS3 127 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 PXDC1Q5TGL8 231 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 PXT1Q8NFP0 134 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 KCNG3Q8TAE7 436 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 MARCH1Q8TCQ1 289 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 FSCN3Q9NQT6 498 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 CHCHD2Q9Y6H1 151 aaPredicted RBP20.65■□□□□ 0.9
NDEL1-201ENST00000334527 BCL2L11O43521 198 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 EIF1P41567 113 aaKnown RBP20.65■□□□□ 0.9
NDEL1-201ENST00000334527 LUMP51884 338 aaPredicted RBP20.65■□□□□ 0.9
NDEL1-201ENST00000334527 SLC26A1Q9H2B4 701 aa20.65■□□□□ 0.9
NDEL1-201ENST00000334527 CACNA1EQ15878 2313 aa20.64■□□□□ 0.9
NDEL1-201ENST00000334527 A0A1W2PP11 408 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 RNF222A6NCQ9 220 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 DHPSP49366 369 aaPredicted RBP20.64■□□□□ 0.89
NDEL1-201ENST00000334527 CLDN17P56750 224 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 TAGLNQ01995 201 aaKnown RBP20.64■□□□□ 0.89
NDEL1-201ENST00000334527 DOK3Q7L591 496 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 SPERTQ8NA61 448 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 GPER1Q99527 375 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 TMEM59Q9BXS4 323 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 SHARPINQ9H0F6 387 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 OCIAD1Q9NX40 245 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 RASL12Q9NYN1 266 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 CFAP54Q96N23 3096 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 GSTP1P09211 210 aaKnown RBP20.64■□□□□ 0.89
NDEL1-201ENST00000334527 HIST1H1DP16402 221 aaKnown RBP20.64■□□□□ 0.89
NDEL1-201ENST00000334527 CCL1P22362 96 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 SGCAQ16586 387 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 ZNF239Q16600 458 aaKnown RBP20.64■□□□□ 0.89
NDEL1-201ENST00000334527 MICBQ29980 383 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 ACOT7LQ6ZUV0 252 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 HOGA1Q86XE5 327 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 ELP5Q8TE02 316 aa20.64■□□□□ 0.89
NDEL1-201ENST00000334527 MED12Q93074 2177 aa20.63■□□□□ 0.89
NDEL1-201ENST00000334527 DUS4LO95620 317 aaKnown RBP20.63■□□□□ 0.89
NDEL1-201ENST00000334527 ADH6P28332 368 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms