RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GP1BAP07359 652 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 CHRM2P08172 466 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 CLRN1P58418 232 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 PPIAP62937 165 aaKnown RBP13.62□□□□□ -0.23
BRCC3-201ENST00000330045 FOXK1P85037 733 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 INPP5JQ15735 1006 aaPredicted RBP13.62□□□□□ -0.23
BRCC3-201ENST00000330045 OR4K15Q8NH41 348 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 NUBPLQ8TB37 319 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 MARCH1Q8TCQ1 289 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 FN3KRPQ9HA64 309 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 KLRF1Q9NZS2 232 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 MBD2Q9UBB5 411 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 POLR1DQ9Y2S0 133 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 HRH3Q9Y5N1 445 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 LHFPL6Q9Y693 200 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 ADAMTS20P59510 1910 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 TECTAO75443 2155 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 C5orf51A6NDU8 294 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF878C9JN71 531 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 SIGLEC5O15389 551 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 WDPCPO95876 746 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 HEXBP07686 556 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 ABOP16442 354 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF41P51814 821 aaPredicted RBP13.61□□□□□ -0.23
BRCC3-201ENST00000330045 AFF3P51826 1226 aaKnown RBP13.61□□□□□ -0.23
BRCC3-201ENST00000330045 DEFA5Q01523 94 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 SIGLEC14Q08ET2 396 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 MYBPHQ13203 477 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 SHBQ15464 509 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 GLIPR1L1Q6UWM5 242 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 RNF144BQ7Z419 303 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 COMMD2Q86X83 199 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 HOGA1Q86XE5 327 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 TMEM185AQ8NFB2 350 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 BPIFCQ8NFQ6 507 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 OR2AJ1Q8NGZ0 328 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 FBXW5Q969U6 566 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 ARPC5LQ9BPX5 153 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 AIFM2Q9BRQ8 373 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 LPAR5Q9H1C0 372 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 PPP4R1LQ9P1A2 415 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 C13orf42A0A1B0GVH6 325 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 ETV2O00321 342 aaPredicted RBP13.61□□□□□ -0.23
BRCC3-201ENST00000330045 TSPAN9O75954 239 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 PSMB6P28072 239 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 DHPSP49366 369 aaPredicted RBP13.61□□□□□ -0.23
BRCC3-201ENST00000330045 RHBDD2Q6NTF9 364 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 UEVLDQ8IX04 471 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 OR2I1PQ8NGU4 316 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 ELP5Q8TE02 316 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 LRRC46Q96FV0 321 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 MRGPRX4Q96LA9 322 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 MOB1AQ9H8S9 216 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 CHMP1AQ9HD42 196 aaPredicted RBP13.61□□□□□ -0.23
BRCC3-201ENST00000330045 SDHAF3Q9NRP4 125 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 SRPK3Q9UPE1 567 aa13.61□□□□□ -0.23
BRCC3-201ENST00000330045 MRPS28Q9Y2Q9 187 aaKnown RBP13.61□□□□□ -0.23
BRCC3-201ENST00000330045 A0A0A6YYD4 124 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 TRBV11-1A0A0K0K1C0 115 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 DBX1A6NMT0 343 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 MPIG6BO95866 241 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 TAS2R31P59538 309 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 MC2RQ01718 297 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 UNQ6126/PRO20091Q6UXV3 157 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 ABHD12BQ7Z5M8 362 aaPredicted RBP13.6□□□□□ -0.23
BRCC3-201ENST00000330045 CCDC36Q8IYA8 594 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 UBALD2Q8IYN6 164 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 TMEM104Q8NE00 496 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 TMEM41AQ96HV5 264 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 PCED1AQ9H1Q7 454 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF768Q9H5H4 540 aaKnown RBP13.6□□□□□ -0.23
BRCC3-201ENST00000330045 NCOR1O75376 2440 aa13.6□□□□□ -0.23
BRCC3-201ENST00000330045 PHF3Q92576 2039 aaKnown RBP13.6□□□□□ -0.23
BRCC3-201ENST00000330045 IGHG1P01857 330 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 OPN1LWP04000 364 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 CRHP06850 196 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 PGA4P0DJD7 388 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 PGA3P0DJD8 388 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 SLC2A1P11166 492 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 CDAP32320 146 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 SERPINF1P36955 418 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 WDR74Q6RFH5 385 aaPredicted RBP13.59□□□□□ -0.23
BRCC3-201ENST00000330045 OR5AS1Q8N127 324 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 NOXO1Q8NFA2 376 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 TERB2Q8NHR7 220 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 RAB3CQ96E17 227 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 SOX7Q9BT81 388 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 PIGMQ9H3S5 423 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 ADAMTS9Q9P2N4 1935 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 IGLV3-12A0A075B6K2 115 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 DNASE2O00115 360 aaPredicted RBP13.59□□□□□ -0.23
BRCC3-201ENST00000330045 SOCS1O15524 211 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 KCNAB3O43448 404 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 GSTP1P09211 210 aaKnown RBP13.59□□□□□ -0.23
BRCC3-201ENST00000330045 MSX1P28360 303 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 MFAP5Q13361 173 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 MICBQ29980 383 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 PLPPR5Q32ZL2 321 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 SLC25A53Q5H9E4 307 aa13.59□□□□□ -0.23
BRCC3-201ENST00000330045 OR5AP2Q8NGF4 316 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms