RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR10J5Q8NHC4 309 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 CMTM2Q8TAZ6 248 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 A0A1B0GV72 72 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 LDB3O75112 727 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 FGF2P09038 288 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ECH1Q13011 328 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PPP1R1AQ13522 171 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ELOBQ15370 118 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 CIB3Q96Q77 187 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ARHGDIGQ99819 225 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 CTDSP1Q9GZU7 261 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF552Q9H707 407 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PARP11Q9NR21 331 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 NDUFS8O00217 210 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SEMG1P04279 462 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 F13BP05160 661 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ATF1P18846 271 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 KIR2DS3Q14952 304 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 OR4N5Q8IXE1 308 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PGBD5Q8N414 524 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ARHGEF39Q8N4T4 335 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 TCTEX1D1Q8N7M0 179 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 IRF7Q92985 503 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ACTR3CQ9C0K3 210 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 LIN7CQ9NUP9 197 aaKnown RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 CLCF1Q9UBD9 225 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 LTBP1Q14766 1721 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 A0A087WUU8 490 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 CLDN34H7C241 214 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 JMJD7P0C870 316 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 HNRNPKP61978 463 aaKnown RBP eCLIP6.41□□□□□ -1.381e-6■□□□□ 9.3
SMC1A-201ENST00000322213 FAM57BQ71RH2 274 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 THNSL2Q86YJ6 484 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 IL22RA1Q8N6P7 574 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 RPUSD4Q96CM3 377 aaKnown RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SLC6A18Q96N87 628 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SEMA6CQ9H3T2 930 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 HRASLS2Q9NWW9 162 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 RCC2Q9P258 522 aaKnown RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PCOLCE2Q9UKZ9 415 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 COL16A1Q07092 1604 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 OTOGLQ3ZCN5 2332 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF749O43361 778 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 TUSC2O75896 110 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SLC6A12P48065 614 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 NPBWR1P48145 328 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SULT1A2P50226 295 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 NSDHLQ15738 373 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 OR8G2PQ6IF36 304 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 NPSR1Q6W5P4 371 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 TMPPEQ6ZT21 453 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SCD5Q86SK9 330 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF761Q86XN6 746 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 HMGCLL1Q8TB92 370 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PSMF1Q92530 271 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SLC17A9Q9BYT1 436 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 LAMP3Q9UQV4 416 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PIGLQ9Y2B2 252 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 TECTAO75443 2155 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 USF1P22415 310 aaPredicted RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 CD96P40200 585 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 NAAAQ02083 359 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 SMAD4Q13485 552 aaKnown RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 HABP2Q14520 560 aaPredicted RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 EXOSC7Q15024 291 aaKnown RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 WDR73Q6P4I2 378 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 RBM45Q8IUH3 476 aaKnown RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF738Q8NE65 137 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 GTF3AQ92664 365 aaKnown RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 PLAC1Q9HBJ0 212 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 COA4Q9NYJ1 87 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 CXXC1Q9P0U4 656 aaPredicted RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 NTNG1Q9Y2I2 539 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 TRBV23OR9-2A0A075B6M9 112 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 TMEM272A0A1B0GTI8 110 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 A0A1B0GTL3 188 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 LOC107986453A0A1B0GWG9 222 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 UBE2CO00762 179 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 CTNSO60931 367 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 LIMS3P0CW19 117 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 LIMS4P0CW20 117 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 ADPRHP54922 357 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 SNU13P55769 128 aaKnown RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 PCBD1P61457 104 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 MLC1Q15049 377 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 SGCBQ16585 318 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 MARCH8Q5T0T0 291 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 PLXDC2Q6UX71 529 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 EIF4E3Q8N5X7 224 aaKnown RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 MARCH1Q8TCQ1 289 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 MYOTQ9UBF9 498 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 OSGIN2Q9Y236 505 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 PLSCR5A0PG75 271 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 C1QAP02745 245 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 OR8U8P0C7N1 319 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 ANGPTL5Q86XS5 388 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 SLC35G3Q8N808 338 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 NTNG2Q96CW9 530 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 OR1F2PQ96R84 312 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 IGLON5A6NGN9 336 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms