RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 AQP8O94778 261 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 IFNA4P05014 189 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 NGFRP08138 427 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 TAGLN2P37802 199 aaKnown RBP13.71□□□□□ -0.21
VARS2-201ENST00000321897 YRDCQ86U90 279 aaKnown RBP13.71□□□□□ -0.21
VARS2-201ENST00000321897 GPR137CQ8N3F9 429 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 SLC30A7Q8NEW0 376 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 OR1L3Q8NH93 324 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 NELFAQ9H3P2 528 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 EXOGQ9Y2C4 368 aaKnown RBP13.71□□□□□ -0.21
VARS2-201ENST00000321897 COL4A6Q14031 1691 aa13.71□□□□□ -0.21
VARS2-201ENST00000321897 ANKRD20A5PA0PJZ0 165 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 IFNA10P01566 189 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 ZNF93P35789 620 aaPredicted RBP13.71□□□□□ -0.22
VARS2-201ENST00000321897 CASRP41180 1078 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 NPBWR1P48145 328 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 HOXA1P49639 335 aaPredicted RBP13.71□□□□□ -0.22
VARS2-201ENST00000321897 H2BFSP57053 126 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 C19orf48Q6RUI8 117 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 SULF2Q8IWU5 870 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 GALNT16Q8N428 558 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 OR10D4PQ8NGN7 298 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 GHRLQ9UBU3 117 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 MTFP1Q9UDX5 166 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 MOKQ9UQ07 419 aa13.71□□□□□ -0.22
VARS2-201ENST00000321897 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.22
VARS2-201ENST00000321897 A0A087WV48 116 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 RNASEK-C17orf49H0YIS7 233 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 OR2C1O95371 312 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 IGHG1P01857 330 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 P04436 131 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 GUSBP08236 651 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 GNB3P16520 340 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 CHATP28329 748 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 BLVRBP30043 206 aaPredicted RBP13.7□□□□□ -0.22
VARS2-201ENST00000321897 ZNF84P51523 738 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 PPA1Q15181 289 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 CD300LDQ6UXZ3 194 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 TMEM217Q8N7C4 229 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 GVQW1Q8N7I0 195 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 RHBDD1Q8TEB9 315 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 FRZBQ92765 325 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 WWTR1Q9GZV5 400 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 WIF1Q9Y5W5 379 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 TRAV8-7A0A075B6U6 113 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 PLSCR5A0PG75 271 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 XRCC3O43542 346 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 XRCC2O43543 280 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 CT45A8P0DMV1 189 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 CT45A9P0DMV2 189 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 FCGR2AP12318 317 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 EPHA1P21709 976 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 ASCL1P50553 236 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 CT45A2Q5DJT8 189 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 DMKNQ6E0U4 476 aaPredicted RBP13.7□□□□□ -0.22
VARS2-201ENST00000321897 SECTM1Q8WVN6 248 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 PIGCQ92535 297 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 VN1R1Q9GZP7 353 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 UNKLQ9H9P5 680 aaKnown RBP13.7□□□□□ -0.22
VARS2-201ENST00000321897 ACAD8Q9UKU7 415 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 FREM3P0C091 2139 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 SMCO3A2RU48 225 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 PRSS37A4D1T9 235 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 LINC00587B1AMM8 73 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 ADAP1O75689 374 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 RPA2P15927 270 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 ABOP16442 354 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 DPP4P27487 766 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 NANOS3P60323 173 aaKnown RBP13.7□□□□□ -0.22
VARS2-201ENST00000321897 C17orf67Q0P5P2 114 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 FOXF1Q12946 379 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 TGIF1Q15583 401 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 HAGHQ16775 308 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 GAB4Q2WGN9 574 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 GLIPR1L1Q6UWM5 242 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 OVCH2Q7RTZ1 564 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 DPPA2Q7Z7J5 298 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 SYS1Q8N2H4 156 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 FAM181AQ8N9Y4 354 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 OR1S1Q8NH92 325 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 SLC19A3Q9BZV2 496 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 EXOSC3Q9NQT5 275 aaKnown RBP13.7□□□□□ -0.22
VARS2-201ENST00000321897 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
VARS2-201ENST00000321897 UBE2J1Q9Y385 318 aaPredicted RBP13.7□□□□□ -0.22
VARS2-201ENST00000321897 MED13LQ71F56 2210 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 DSPPQ9NZW4 1301 aa13.7□□□□□ -0.22
VARS2-201ENST00000321897 ABCD4O14678 606 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 ZNF205O95201 554 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 IGHA1P01876 353 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 CD79AP11912 226 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 EFNB2P52799 333 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 TAS2R31P59538 309 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 DCDP81605 110 aaKnown RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 HSF1Q00613 529 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 GRINAQ7Z429 371 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 OR51A2Q8NGJ7 313 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 HAS2Q92819 552 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 VWCEQ96DN2 955 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 A0A1W2PPH5 198 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms