RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FAM25EA8MYX2 175 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 EEF1E1-BLOC1S5C9J1V9 151 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 ZNF878C9JN71 531 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 DUX1O43812 170 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 EFNA2O43921 213 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 ATG12O94817 140 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 LYL1P12980 280 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 HIST1H1DP16402 221 aaKnown RBP7.71□□□□□ -1.18
CLK1-201ENST00000321356 AKR1C4P17516 323 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 SERPINF1P36955 418 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 CSNK1EP49674 416 aaKnown RBP7.71□□□□□ -1.18
CLK1-201ENST00000321356 P2RY4P51582 365 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 DEFA5Q01523 94 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 MICBQ29980 383 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 ACTBL2Q562R1 376 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 TMEM128Q5BJH2 165 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 PLAC9Q5JTB6 97 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 THEM4Q5T1C6 240 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 KCTD9Q7L273 389 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 RNF144BQ7Z419 303 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 PEG10Q86TG7 708 aaKnown RBP7.71□□□□□ -1.18
CLK1-201ENST00000321356 NAA40Q86UY6 237 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 KMT5CQ86Y97 462 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 TMEM104Q8NE00 496 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 OR4K15Q8NH41 348 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 NUBPLQ8TB37 319 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 OR51E1Q8TCB6 317 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 SSC4DQ8WTU2 575 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 TMEM230Q96A57 120 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 EMC6Q9BV81 110 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 SLC6A15Q9H2J7 730 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 PCDHB16Q9NRJ7 776 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 CYTL1Q9NRR1 136 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 FGF21Q9NSA1 209 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 SHPKQ9UHJ6 478 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 PURGQ9UJV8 347 aaKnown RBP7.71□□□□□ -1.18
CLK1-201ENST00000321356 GPR132Q9UNW8 380 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 SRPK3Q9UPE1 567 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 VDAC3Q9Y277 283 aa7.71□□□□□ -1.18
CLK1-201ENST00000321356 IGLV3-32A0A0A0MS00 114 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 H0YIZ8 118 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 TRAF3IP2O43734 574 aaPredicted RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 PIAS2O75928 621 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PMP2P02689 132 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PGA4P0DJD7 388 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PGA3P0DJD8 388 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 CD79AP11912 226 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PGAM2P15259 253 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 ZNF17P17021 662 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 ZNF20P17024 532 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 BCKDHBP21953 392 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 CCL1P22362 96 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 TMEM50BP56557 158 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 FOXL2P58012 376 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 CYCSP99999 105 aaKnown RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 STK11Q15831 433 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 C10orf91Q5T1B1 145 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 IQCF2Q8IXL9 164 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 NOXO1Q8NFA2 376 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 KCNG3Q8TAE7 436 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 STT3BQ8TCJ2 826 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 RRNAD1Q96FB5 475 aaKnown RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 MRGPRX4Q96LA9 322 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 OCSTAMPQ9BR26 566 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 MESP1Q9BRJ9 268 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PCED1AQ9H1Q7 454 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 C5orf66Q9H5L9 145 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 RAB18Q9NP72 206 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 MRPS28Q9Y2Q9 187 aaKnown RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 CSAG2Q9Y5P2 127 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 B3GALT1Q9Y5Z6 326 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SPAG17Q6Q759 2223 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 C5orf51A6NDU8 294 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 NUDT19A8MXV4 375 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SHISA8B8ZZ34 492 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 H3BML4 177 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 MFNGO00587 321 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SOCS1O15524 211 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SIGLEC6O43699 453 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 CDC14BO60729 498 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 RAD51DO75771 328 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PLATP00750 562 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 TPT1P13693 172 aaKnown RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 ABOP16442 354 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 FPR2P25090 351 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 MSX1P28360 303 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SLC6A9P48067 706 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SUPT4H1P63272 117 aaKnown RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 FLI1Q01543 452 aaPredicted RBP7.7□□□□□ -1.18
CLK1-201ENST00000321356 MYBPHQ13203 477 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 COL19A1Q14993 1142 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 KCNMB1Q16558 191 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SGCAQ16586 387 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 PLPPR5Q32ZL2 321 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 CCDC157Q569K6 752 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 RHBDD2Q6NTF9 364 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SLC25A47Q6Q0C1 308 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 GLIPR1L1Q6UWM5 242 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 UNQ6126/PRO20091Q6UXV3 157 aa7.7□□□□□ -1.18
CLK1-201ENST00000321356 SHISA6Q6ZSJ9 500 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms