RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 TP53TG5Q9Y2B4 290 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 NOSIPQ9Y314 301 aaKnown RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 EMC9Q9Y3B6 208 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 MED12Q93074 2177 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 CIB4A0PJX0 185 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 ARPC1BO15143 372 aaKnown RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 DHHO43323 396 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 ALDOBP05062 364 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 UBCP0CG48 685 aaKnown RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 CDAP32320 146 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 GUCA1AP43080 201 aaPredicted RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 RNPS1Q15287 305 aaKnown RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 PCGF3Q3KNV8 242 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 PLEKHN1Q494U1 663 aaPredicted RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 TMEM244Q5VVB8 128 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 PLXDC2Q6UX71 529 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 MCEMP1Q8IX19 187 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 GPR137CQ8N3F9 429 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 RNF133Q8WVZ7 376 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 SLC25A28Q96A46 364 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 SARAFQ96BY9 339 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 MS4A3Q96HJ5 214 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 ZNF436Q9C0F3 470 aaPredicted RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 BCO1Q9HAY6 547 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 BEX1Q9HBH7 125 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 NPDC1Q9NQX5 325 aaPredicted RBP11.12□□□□□ -0.63
PTPN6-201ENST00000318974 DLL4Q9NR61 685 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 OR52A1Q9UKL2 312 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 ZNF175Q9Y473 711 aa11.12□□□□□ -0.63
PTPN6-201ENST00000318974 ZNF724A8MTY0 619 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 WISP2O76076 250 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 IL5P05113 134 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 HTR2CP28335 458 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 MMP16P51512 607 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 ZNF84P51523 738 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 EFNB2P52799 333 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 ZP1P60852 638 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 CXADRP78310 365 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 RBMS2Q15434 407 aaKnown RBP11.11□□□□□ -0.63
PTPN6-201ENST00000318974 KCNMB1Q16558 191 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 LINC00346Q8IVM7 164 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 TUSC5Q8IXB3 177 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 OR6M1Q8NGM8 313 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 OR13C3Q8NGS6 347 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 SNAPC3Q92966 411 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 RBM24Q9BX46 236 aaKnown RBP11.11□□□□□ -0.63
PTPN6-201ENST00000318974 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
PTPN6-201ENST00000318974 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 TAS2R4Q9NYW5 299 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 TMEM272A0A1B0GTI8 110 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 TMEM269A0A1B0GVZ9 245 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 LOC107986453A0A1B0GWG9 222 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 SNRPGP15A8MWD9 76 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 MRPL33O75394 65 aaKnown RBP11.11□□□□□ -0.63
PTPN6-201ENST00000318974 CRYABP02511 175 aaKnown RBP11.11□□□□□ -0.63
PTPN6-201ENST00000318974 H2BFMP0C1H6 154 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 PRSS3P35030 304 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 HTR2BP41595 481 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 CAPZA1P52907 286 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 FOXL2NBQ6ZUU3 175 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.11□□□□□ -0.63
PTPN6-201ENST00000318974 SPICQ8N5J4 248 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 NKAIN3Q8N8D7 197 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 OR11H4Q8NGC9 324 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
PTPN6-201ENST00000318974 RADILQ96JH8 1075 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 CYB5R1Q9UHQ9 305 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 POLR1DQ9Y2S0 133 aa11.11□□□□□ -0.63
PTPN6-201ENST00000318974 TRAV18A0A075B6X5 111 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 A0A0A6YYH2 397 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 A6NJ64 397 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 SLC22A20A6NK97 555 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 SULT1C2O00338 296 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 DNASE1P24855 282 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 SGCAQ16586 387 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 GLYATL3Q5SZD4 288 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 FAAP20Q6NZ36 180 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 NELFAQ9H3P2 528 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 C1orf198Q9H425 327 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 CALHM2Q9HA72 323 aa11.1□□□□□ -0.63
PTPN6-201ENST00000318974 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 C1QTNF9BB2RNN3 333 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 CREBL2O60519 120 aaPredicted RBP11.09□□□□□ -0.63
PTPN6-201ENST00000318974 KDM4BO94953 1096 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 C1QTNF9P0C862 333 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 AKAIN1P0CW23 69 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 FCGR2AP12318 317 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 GABRA1P14867 456 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 MSR1P21757 451 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 RAD52P43351 418 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 GNG2P59768 71 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 ACTBP60709 375 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 LSM6P62312 80 aaKnown RBP11.09□□□□□ -0.63
PTPN6-201ENST00000318974 ACTG1P63261 375 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 RIPPLY2Q5TAB7 128 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 ZNF626Q68DY1 528 aa11.09□□□□□ -0.63
PTPN6-201ENST00000318974 CORO6Q6QEF8 472 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms