RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 NKX3-1Q99801 234 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-201ENST00000318023 TWSG1Q9GZX9 223 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 LUZP4Q9P127 313 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 SERTAD3Q9UJW9 196 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 ADAM18Q9Y3Q7 739 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CHD3Q12873 2000 aaKnown RBP8.39□□□□□ -1.07
CAPN3-201ENST00000318023 A0A0J9YY10 115 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 A0A1B0GTI1 187 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 MSGN1A6NI15 193 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 NPIPB8E9PQR5 432 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CA11O75493 328 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 TGFB1P01137 390 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CHRM4P08173 479 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 FCGR3AP08637 254 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 IL3P08700 152 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 SRMP19623 302 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 OTX2P32243 289 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CEACAM6P40199 344 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF85Q03923 595 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 RASGEF1BQ0VAM2 473 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 ANGPTL5Q86XS5 388 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 OR14K1Q8NGZ2 314 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 FOXRED1Q96CU9 486 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-201ENST00000318023 R3HDM4Q96D70 268 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 G6PC3Q9BUM1 346 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 KCNK15Q9H427 330 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 NRIP3Q9NQ35 241 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 CYTL1Q9NRR1 136 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 PADI1Q9ULC6 663 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 MED13Q9UHV7 2174 aa8.39□□□□□ -1.07
CAPN3-201ENST00000318023 A0A1B0GV50 99 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 PRAMEF27A3QJZ7 478 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 CDC42EP2O14613 210 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 PMS2P2O95744 297 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 IL18BPO95998 194 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 SPARCP09486 303 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 NRMQ8IXM6 262 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 BHLHE23Q8NDY6 225 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF501Q96CX3 271 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 HAVCR1Q96D42 359 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF607Q96SK3 696 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 TUBA4BQ9H853 241 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 SIDT1Q9NXL6 827 aaKnown RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 TRPC4Q9UBN4 977 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 STEAP1Q9UHE8 339 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 SCN2AQ99250 2005 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 A0A087WZY1 265 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 SMCO3A2RU48 225 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 DUXAA6NLW8 204 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 UMAD1C9J7I0 102 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 F8VVB4 439 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 F8VWA3 439 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 H7C417 338 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 HMGN4O00479 90 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ADAM10O14672 748 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 PIN1P1O15428 100 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 XRCC3O43542 346 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 B4GALT2O60909 372 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 CRHP06850 196 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 KLK1P06870 262 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 DVL1P1P54792 670 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 RPS11P62280 158 aaKnown RBP eCLIP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 C6orf15Q6UXA7 325 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 MEPCEQ7L2J0 689 aaKnown RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 OR2T33Q8NG76 320 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ASB17Q8WXJ9 295 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 SMPDL3AQ92484 453 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 KISS1RQ969F8 398 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 SLC41A2Q96JW4 573 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 PRRC1Q96M27 445 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 MENTQ9BUN1 341 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 MTFP1Q9UDX5 166 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ST6GALNAC2Q9UJ37 374 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 A0A087WV62 115 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 TRBV2A0A0J9YWF9 115 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 A0A1W2PPV9 198 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 C5orf51A6NDU8 294 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 TRGC2P03986 189 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 NR2F1P10589 423 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 MSX1P28360 303 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 SLC10A1Q14973 349 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 FCRL6Q6DN72 434 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 OR2T2Q6IF00 324 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 PRSS41Q7RTY9 318 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ZNF615Q8N8J6 731 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ZSCAN4Q8NAM6 433 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 OR2L8Q8NGY9 312 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 PIGXQ8TBF5 258 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 CT55Q8WUE5 264 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 COL26A1Q96A83 441 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 ZBTB8AQ96BR9 441 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 DNAJA3Q96EY1 480 aa8.38□□□□□ -1.07
CAPN3-201ENST00000318023 FARSAQ9Y285 508 aaKnown RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 MRPS2Q9Y399 296 aaKnown RBP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
CAPN3-201ENST00000318023 IGKV1-8A0A0C4DH67 115 aa8.37□□□□□ -1.07
CAPN3-201ENST00000318023 CDC14CA4D256 554 aa8.37□□□□□ -1.07
CAPN3-201ENST00000318023 TCF21O43680 179 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms