RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 CD300LBA8K4G0 201 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 CLPSP04118 112 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 PRF1P14222 555 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 MAGEA5P43359 124 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 PAN3Q58A45 887 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ELFN2Q5R3F8 820 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 C16orf47Q6ZP98 133 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 KCNG3Q8TAE7 436 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 SFXN3Q9BWM7 321 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 LOC101059948A0A1B0GTJ6 334 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 LYPD3O95274 346 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 FAM157BP0CG42 384 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 RTL8BQ17RB0 113 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ANKRD16Q6P6B7 361 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 TIPARPQ7Z3E1 657 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 BCDIN3DQ7Z5W3 292 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 MRGPRGQ86SM5 289 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 IL1F10Q8WWZ1 152 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 TMEM106AQ96A25 262 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 BCO1Q9HAY6 547 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 MED29Q9NX70 200 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 FOXJ3Q9UPW0 622 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 DOCK9Q9BZ29 2069 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 A0A1B0GTH9 108 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 GABARAPH6UMI1 98 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 NME2P1O60361 137 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ADH4P08319 380 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 NME2P22392 152 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 TNFAIP6P98066 277 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 H3F3CQ6NXT2 135 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ZBTB46Q86UZ6 589 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 MUC20Q8N307 709 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 COL25A1Q9BXS0 654 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 NMNAT2Q9BZQ4 307 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ATPIF1Q9UII2 106 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 COPS3Q9UNS2 423 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 LIPGQ9Y5X9 500 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 CNOT1A5YKK6 2376 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 PSMB10P40306 273 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CTF1Q16619 201 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CEACAM16Q2WEN9 425 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 MESTQ5EB52 335 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CD276Q5ZPR3 534 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC22A24Q8N4F4 322 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 PP6455Q8WZ26 134 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 S1PR3Q99500 378 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CCL19Q99731 98 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TTTY12Q9BZ98 90 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 ARID1BQ8NFD5 2236 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 RIF1Q5UIP0 2472 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 M0R135 149 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TERTO14746 1132 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 GPX5O75715 221 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 OR7C1O76099 320 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CHRM2P08172 466 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CTXN2P0C2S0 81 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 DEFA4P12838 97 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 DOC2BQ14184 412 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 MEF2DQ14814 521 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 P2RY6Q15077 328 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF239Q16600 458 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 NRN1LQ496H8 165 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CDC20BQ86Y33 519 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 GABRG1Q8N1C3 465 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 STOML3Q8TAV4 291 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SNAPC3Q92966 411 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 WNT2BQ93097 391 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF799Q96GE5 643 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 RNF24Q9Y225 148 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 KANTRA0A1W2PQU2 76 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 COL4A2P08572 1712 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 ETV6P41212 452 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 RAB1AP62820 205 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SNTB2Q13425 540 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 RTP5Q14D33 572 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SFXN4Q6P4A7 337 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SGPP2Q8IWX5 399 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC30A7Q8NEW0 376 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 OR6K3Q8NGY3 331 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 RPL3LQ92901 407 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 C4orf45Q96LM5 186 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC17A5Q9NRA2 495 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TAAR3PQ9P1P4 343 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 SPRY3O43610 288 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 CST2P09228 141 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 NFYBP25208 207 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 RBP2P50120 134 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 MICBQ29980 383 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 DMKNQ6E0U4 476 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 PELI1Q96FA3 418 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TMEM246Q9BRR3 403 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 NAA50Q9GZZ1 169 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 PLEKHA3Q9HB20 300 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TAS2R5Q9NYW4 299 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 GDF2Q9UK05 429 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 FBXL2Q9UKC9 423 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 PLXND1Q9Y4D7 1925 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TRGV10A0A0A0MS01 117 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 TRAV38-1A0A0B4J264 116 aa7.6□□□□□ -1.19
PDLIM5-201ENST00000317968 ZC3H12DA2A288 527 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms