RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MPPED2Q15777 294 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 GRK1Q15835 563 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 ZNF813Q6ZN06 617 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 OR2AK2Q8NG84 335 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 ANGPTL6Q8NI99 470 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 TNFAIP8L1Q8WVP5 186 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 FAM46BQ96A09 425 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 ZBTB8AQ96BR9 441 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 GAL3ST1Q99999 423 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 TMEM185BQ9H7F4 350 aa12.52□□□□□ -0.4
VRK3-201ENST00000316763 A0A1W2PNR3 127 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 PLSCR5A0PG75 271 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 ARGFXA6NJG6 315 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 ZNF736B4DX44 427 aaPredicted RBP12.52□□□□□ -0.41
VRK3-201ENST00000316763 F5H5P2 479 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 TRAF3IP2O43734 574 aaPredicted RBP12.52□□□□□ -0.41
VRK3-201ENST00000316763 LMX1BO60663 402 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 MPC2O95563 127 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 PMS2P2O95744 297 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 BPNT1O95861 308 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 ITGB2P05107 769 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 NR2C1P13056 603 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 ZNF20P17024 532 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 RAB3AP20336 220 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 P2RY4P51582 365 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 RRADP55042 308 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 SLC35A1P78382 337 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 ZNF239Q16600 458 aaKnown RBP12.52□□□□□ -0.41
VRK3-201ENST00000316763 DEFB109BQ30KR1 87 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 C4orf46Q504U0 113 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 SLC25A47Q6Q0C1 308 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 CHMP1BQ7LBR1 199 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 LYPD6Q86Y78 171 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 ZNF584Q8IVC4 421 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 GALNT16Q8N428 558 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 OR4D6Q8NGJ1 314 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 PNPLA2Q96AD5 504 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 GNRHR2Q96P88 292 aa12.52□□□□□ -0.41
VRK3-201ENST00000316763 LOC102725191A0A1B0GVB3 256 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 DISC1C4P0D8 188 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 G3V3Y1 287 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 NEURL1O76050 574 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 OPN1LWP04000 364 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 AMY2AP04746 511 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 DSCR4P56555 118 aaPredicted RBP12.51□□□□□ -0.41
VRK3-201ENST00000316763 GMFBP60983 142 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 MEF2DQ14814 521 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 TMEM176BQ3YBM2 270 aaPredicted RBP12.51□□□□□ -0.41
VRK3-201ENST00000316763 CLLU1Q5K131 121 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 MUC20Q8N307 709 aaPredicted RBP12.51□□□□□ -0.41
VRK3-201ENST00000316763 OR5M1Q8NGP8 315 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 OR1J2Q8NGS2 313 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 ELMOD3Q96FG2 381 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 CNTD2Q9H8S5 307 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 LRFN1Q9P244 771 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 ABI3Q9P2A4 366 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 LHFPL6Q9Y693 200 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 PHF3Q92576 2039 aaKnown RBP12.51□□□□□ -0.41
VRK3-201ENST00000316763 CFAP47Q6ZTR5 3102 aa12.51□□□□□ -0.41
VRK3-201ENST00000316763 A0A0G2JMM0 328 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 A0A1W2PPB8 328 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 A0A1W2PRS3 328 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 TMEM82A0PJX8 343 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 TMEM8BA6NDV4 472 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 TUBAL3A6NHL2 446 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 AQP7P3A6NL99 342 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 HMSDA8MTL9 139 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 KIR3DP1A8MWS1 328 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 K7ENP7 123 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 SULT2B1O00204 365 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 GOSR2O14653 212 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 CBR3O75828 277 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 CD74P04233 296 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 FCER2P06734 321 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 SFTPDP35247 375 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 P2RX3P56373 397 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 KCNMB1Q16558 191 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 CARD17Q5XLA6 110 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 OR10K2Q6IF99 312 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 INO80CQ6PI98 192 aaPredicted RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 CFAP77Q6ZQR2 320 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 IDO2Q6ZQW0 420 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 GTPBP8Q8N3Z3 284 aaPredicted RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 OR10S1Q8NGN2 331 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 DEPPQ9NTK1 212 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 MYEF2Q9P2K5 600 aaKnown RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 SLC5A6Q9Y289 635 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 ZIC3O60481 467 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 WDPCPO95876 746 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 CASRP41180 1078 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 GUCA1AP43080 201 aaPredicted RBP12.5□□□□□ -0.41
VRK3-201ENST00000316763 FOXK1P85037 733 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 SPINK14Q6IE38 97 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 C11orf88Q6PI97 169 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 BPIFB2Q8N4F0 458 aa12.5□□□□□ -0.41
VRK3-201ENST00000316763 ACBD4Q8NC06 268 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms